MidgeBase gene description page [Pn.14424]
Outline
| Gene ID | Pn.14424 |
| Type | Protein coding gene |
| Scaffold | PnScaf24277 |
| Start | 40901 |
| End | 43288 |
| Direction | - |
Sequence
Transcript: 2115 (bp)
ATGACGACAATTTATGGAAGAGATCCACTGGAGGCATTATGGAAGGAGATCTTAGATCTTCACTGGAACTATCTTGAAATGGAGGAGAGCTTAAAGAAAATTGAAGAGCGCAAGAAGCTCGAGGGGAGACTAAAGGAGTACATCAGCATTGTGCCACATGACCGAAAGTTTTTTTTGCCGGAGACAGAACATATATTTCGCGTAAGCATCACGCAGATGAGAGACTTCTCAGCATTTAAGGGCGCCATAGGCTTCGAGTCAATTAGTCAGTACGCAAATAATCTCTTTACGAAGCCTTGGCGAAAAGAGTATCGAGTCATTAAGATGTACTCGGGATTTTATCAGCACGAGATCAAGAACAATTTGCTCGATGCTGAGCGTATATTTATCGCGATGGGTTATAAACTAATGCCAAATCAAACTCTCGTGCTCGACGGCCCCATTTGTCCCGATCAATTGACGAACGTCGCGCGTGATGCACTCACGGCCTATGTCGAATGCCAAATCATGAAGCAAGTAAACGCAGAATTGACCTCAAATGGACTCGCTACGACATGGAATGAAATTTTTAGTTATCGTGAGTGCCACATTGGTGACTCGTCACAGACGATCAAAGGACTCACACAGATGATTTCATCGCATCACATGCACATGCACGGCATCATGCGTACAAAGGATTCATATGCTTTGGCTCTTTCATCACCGCCTATGCACCACCAGCAGCAACCGCAACCACAACATTGTAGCATTCACCATCCGTACAATCAGAGCACCACCACTTTGCCACCTCCACCACCAACATCGGCCTCACAAAATTCATATTATCATCAATACAATCCGCCACCGCCGCCCCCTCCTTGCTCCCTTCACCACTATGTGCCACCACCTTCTCTCGCGCCACATCAGCAGCAGCAGGTCAGTTGCTATCACCTCCCTCACTCAAAGTCGCTAGATCAGTACGACGGTGTCGTAAAGATGCAAGGAAATGGCGGAATTAATCATCATCATCGTTTGTCATTAGATCACAATTATAAGCAGCAACTCCAGCACCTTTCACCATCACAGCAGCAGCAACAACAACATCATCATCAGATGCAGCTGCTGCAACAGTCGCCGCAGCCACCGCAGCAAACACAATTCGATTATATTGATGTTGCATTCAATCATCCATACAATCAGCCTAACTCACGAGCACCTCTTCCATATAATCTTTCGTCAAATATAGGTCATGATGCCGGCTTCTATTCAACCGTGCCACCAACATCCTCCGACCATGCGCGAATGTTCAGCACAAATGAATTTTATCAGCAACAACTCATGCAACAACCTCATTTACCAACGACAGTCAGCGACTTTCATCACACACTTCATCAGAGAAATTTGTCGGACGCATCTTCTCCGGCCATACACGATCCCGAGCTTATTTCGTTCACTAATGAGCCCGTTCGAGTCAAACCGACGTCTGAGGCGAAATTGAGGAGTAGCTTGAAAAAAGGAACGCACAGCACATCGGAAAGTGTTGATTTCGACCACGAGTTGCATGAATTGAGGGCGCTCAAAAGAGAAAAGTCACTAACTCCCGCGAGCACGAGTAGTGACATAAAATCACGCGATGGCATCGGTAACTCCCAAGCGTGGGACTACCTGTTTCAGAATCTAGAAAAAGACGAGACGAGAAAGAGCAAGATTGTGACGGCTGATGAAAAAATTGCAGCCGAATTGGAGAATTTAAAGTTGACGGCGAATGGTCATGGACCGCCGCGCGATCGCTCACTTTCGCACAAGACCAACAGCATTAGTCGAAGTATGCCATTAGATAAATCGAGTGGTCAGCACACGAAAGCGCGCACAAAGTCAGTTTCGGCAGCAGCAACAAGTGATACACAGGCGAGCAATCATGAGCACAAGCGAACGTCATCTGTGATGGAAAGCAATCAAAGAGTTCAAATGCAAAAGGCACCAGAATTAATTGTCGGAGTAAATGAGTGGAGCTGTCGCTTCTGTACGTTTCTAAATCCAAATACGAAGAAAATTTGCGAAATGTGCAGTAAATCAAAGGATTTTTTTCTCGACGCTGACAAAAGTACGACAGCTGCAGCCACTGCAACGTGTGTC
Protein: 705 (aa)
MTTIYGRDPLEALWKEILDLHWNYLEMEESLKKIEERKKLEGRLKEYISIVPHDRKFFLPETEHIFRVSITQMRDFSAFKGAIGFESISQYANNLFTKPWRKEYRVIKMYSGFYQHEIKNNLLDAERIFIAMGYKLMPNQTLVLDGPICPDQLTNVARDALTAYVECQIMKQVNAELTSNGLATTWNEIFSYRECHIGDSSQTIKGLTQMISSHHMHMHGIMRTKDSYALALSSPPMHHQQQPQPQHCSIHHPYNQSTTTLPPPPPTSASQNSYYHQYNPPPPPPPCSLHHYVPPPSLAPHQQQQVSCYHLPHSKSLDQYDGVVKMQGNGGINHHHRLSLDHNYKQQLQHLSPSQQQQQQHHHQMQLLQQSPQPPQQTQFDYIDVAFNHPYNQPNSRAPLPYNLSSNIGHDAGFYSTVPPTSSDHARMFSTNEFYQQQLMQQPHLPTTVSDFHHTLHQRNLSDASSPAIHDPELISFTNEPVRVKPTSEAKLRSSLKKGTHSTSESVDFDHELHELRALKREKSLTPASTSSDIKSRDGIGNSQAWDYLFQNLEKDETRKSKIVTADEKIAAELENLKLTANGHGPPRDRSLSHKTNSISRSMPLDKSSGQHTKARTKSVSAAATSDTQASNHEHKRTSSVMESNQRVQMQKAPELIVGVNEWSCRFCTFLNPNTKKICEMCSKSKDFFLDADKSTTAAATATCV
| Type | Start | End | Length |
| CDS |
40904 |
42342 |
1439 |
| CDS |
42481 |
42832 |
352 |
| CDS |
42903 |
43171 |
269 |
| CDS |
43234 |
43288 |
55 |
| intron |
42343 |
42480 |
138 |
| intron |
42833 |
42902 |
70 |
| intron |
43172 |
43233 |
62 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_002016598 |
GL10418 [Drosophila persimilis] gb|EDW32488.1| GL10418 [Drosophila persimilis] |
5e-78 |
| InterPro |
IPR001876 |
Zinc finger, RanBP2-type |
|
| Gene Ontology(CC) |
GO:0005622 |
intracellular |
|
| Gene Ontology(MF) |
GO:0008270 |
zinc ion binding |
|
| Pfam |
PF09409.5 |
PUB domain |
0.00043 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| B. mori |
BGIBMGA001957-TA |
| D. plexippus |
DPOGS210438PA |
| N. vitripennis |
NV10905-PA |
| D. melanogaster |
FBgn0041582 |
| H. melpomene |
HMEL015112-PA |
| P. humanus |
PHUM308730-PA |
| C. quinquefasciatus |
CPIJ002272 |
| S. invicta |
SI2.2.0_05569 |
| T. castaneum |
TC015946-GA |
| A. mellifera |
GB15042-PA |
| H. sapiens |
ENSP00000458083 |
| T. castaneum |
TC015946 |
| P. vanderplanki |
Pv.17696 |
| A. aegypti |
AAEL012166 |
| C. quinquefasciatus |
CPIJ020312 |