MidgeBase gene description page [Pn.14413]
Outline
| Gene ID | Pn.14413 |
| Type | Protein coding gene |
| Scaffold | PnScaf24277 |
| Start | 10075 |
| End | 11127 |
| Direction | - |
Sequence
Transcript: 888 (bp)
ATGAACTTCACGAAACAAGTTCAAGTTTTTCTTTTGAGCTTAGCCGCTTTATCACACGCACAGATTTTAACTCCAAGAATCATTGGCGGCTACAATGTCTCGTCGATTGAGGGGTTTGAGCATCAAGTTTCGATTAGAGACGCCTCATACGAAAGCTCCAATTTTGGATCAGGACATCTCTGCGGCGGAACTCTCATCGATTACGATAAAGTGCTCACAGCGGCACATTGCGTTCATAGTGGACGTCGATATCTTTCTGAAAGGTATTTTATTGTTGTAATGGGAAGCGTTGATCTGTTTGACAGAGGCACAAACACGCTTGTCCGACGAATTAAAAGAATTTACGGGCATCCTAAGTACAACGCAGACACCTTCGAAAATGATCTGGCGGTTTTGATTCTCGTCTCACCTATTCCAACCGATCATCCGACTGCACGACCAATTCCCCTGTCAACGCTTGAGGCAAGAGAGGGTCAAAGCTGCATGTCCTCCGGATGGGGAACAATTGAGTACAGTGACGATGCGACTGCTGTGAGATGGCTGATGGCGGTGGACATAAACGTGAATTCGAGGAAAAACTGCAATCGGCCGTCGAGTCATGATGGCGGTGTACAAAAGGGAATGTTTTGCGCTGGTCCTTTCGAGGGAGGAAAGGATACCTGTCAGGGCGACTCTGGTGGACCCTTCGTTTGCTCGGGAGTGCTCGTCGGCGTTACATCGCATGGTTTCGAATGCGGTCTACCCAATTATCCCGGAATATACATGGACATTGGTTTCTATCGAAAGTGGATCCTTAACCAGAGCAAAAGCGAAGGCAGCTCCATTTTTTCGAATGTAAAAAATTATCTCTACTCCTTCTTTTCTGTTGGTCTCGCGATGTTGGTTAAG
Protein: 296 (aa)
MNFTKQVQVFLLSLAALSHAQILTPRIIGGYNVSSIEGFEHQVSIRDASYESSNFGSGHLCGGTLIDYDKVLTAAHCVHSGRRYLSERYFIVVMGSVDLFDRGTNTLVRRIKRIYGHPKYNADTFENDLAVLILVSPIPTDHPTARPIPLSTLEAREGQSCMSSGWGTIEYSDDATAVRWLMAVDINVNSRKNCNRPSSHDGGVQKGMFCAGPFEGGKDTCQGDSGGPFVCSGVLVGVTSHGFECGLPNYPGIYMDIGFYRKWILNQSKSEGSSIFSNVKNYLYSFFSVGLAMLVK
| Type | Start | End | Length |
| CDS |
10078 |
10465 |
388 |
| CDS |
10551 |
10840 |
290 |
| CDS |
10918 |
11127 |
210 |
| intron |
10466 |
10550 |
85 |
| intron |
10841 |
10917 |
77 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_001865140 |
trypsin-7 [Culex quinquefasciatus] gb|EDS41218.1| trypsin-7 [Culex quinquefasciatus] |
2e-59 |
| InterPro |
IPR009003 |
Peptidase cysteine/serine, trypsin-like |
|
| InterPro |
IPR001314 |
Peptidase S1A, chymotrypsin-type |
|
| InterPro |
IPR001254 |
Peptidase S1/S6, chymotrypsin/Hap |
|
| InterPro |
IPR018114 |
Peptidase S1/S6, chymotrypsin/Hap, active site |
|
| Gene Ontology(BP) |
GO:0006508 |
proteolysis |
|
| Gene Ontology(MF) |
GO:0004252 |
serine-type endopeptidase activity |
|
| Gene Ontology(MF) |
GO:0003824 |
catalytic activity |
|
| Pfam |
PF13365.1 |
Trypsin-like peptidase domain |
0.0013 |
| Pfam |
PF00089.21 |
Trypsin |
1.1e-50 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| A. aegypti |
AAEL013623 |
| T. castaneum |
TC030061 |
| C. quinquefasciatus |
CPIJ015103 |
| A. aegypti |
AAEL013628 |
| T. castaneum |
TC004418 |
| D. melanogaster |
FBgn0025383 |
| A. aegypti |
AAEL008085 |
| D. melanogaster |
FBgn0052755 |
| A. gambiae |
AGAP006087 |
| D. melanogaster |
FBgn0029826 |
| C. quinquefasciatus |
CPIJ015102 |
| T. castaneum |
TC030062 |
| C. quinquefasciatus |
CPIJ015104 |
| D. melanogaster |
FBgn0029827 |
| P. vanderplanki |
Pv.09780 |
| A. aegypti |
AAEL008093 |
| A. aegypti |
AAEL008097 |