MidgeBase gene description page [Pn.14328]
Outline
| Gene ID | Pn.14328 |
| Type | Protein coding gene |
| Scaffold | PnScaf23624 |
| Start | 21565 |
| End | 25007 |
| Direction | - |
Sequence
Transcript: 2139 (bp)
ATGCAGATGAACGTAGCTGGACTGCGAAGAAACATAAAGAACCTGGCACACAATTACAGCGATGCTCAGGTAAAAGTGAGAGAAGCGACATCCAACGATCCATGGGGTCCGTCATCGACGCTGATGGCCGAGATCGCCGATCTGACATACAATGTGGTTGCCTTCTCCGAGATAATGCAGATGATTTGGAAGAGAACGAACGATCACGGAAAGAACTGGCGTCACGTCTACAAAGCACTCTTGCTCCTTGAATATCTCATCAAGACGGGCTCGGAGAAGGTTGCACAGCAATGCAAAGAAAACATTTTCTCAATTCAGACACTCAAGGATTTCCAGCACTTGGAGGAGGGAAAGGATCAGGGCGTTCATGTGCGCGAGAAGGCGAAACAATTAGTGATTTTATTAAAAGACGATGAGCGGCTGAAAGCGGAGCGCGCTCGTGCTCTGAAGGCGAAAGAGCGCTTCGCGAGAACGGCGTCGGGCTTTGGCAGCGACGGCTCGATAGATGGGCCGAGTCGAGATCGTGATACGCCCGTGTGGCCTGAGTCGGATCGACGAAGTGTCAACGACACCGAGTTCGTCCGACCGCAGACTGTCGGCGAGGAGGAGTTGCAGCTGCAGTTAGCCATAGCTATGTCGAAGGAGGAGGCCGAGCAGGAGGAGTCGAAACGACGCTCTGACGACGTGCGGCTACAGCTGGCGCTCAGTCAGAGTGAACAAGACTTTAAGAAGCAGTCGGATAAGAAGCCCGAGGGCACTCTCGTGGACTTGCTAGGTGACATTTCGTTCGGCGGTGCAGTGGGCGGCGTTCCGAGTCCGCCACCGCAACAGGATCCCTGGGGACTGCCTCAACCACAGCCTCGTGCAACGGGCAACGACATGTGGTCTTCGAAGCCAGATCCGTGGTTGCCGCCACCTCCCATGAGCAACGGTGCATCCGCTTCTGCTTTTTCCGCTTTGGCATCTGAACCGAGTTTGGGCGCGAGGACGAAGTCGCCGGCCGGCAACTCGAGTTCGTCAATTGAAGGATGGCTGCAGACAGTTCCTCCGCCGACGTCCAATGCCGTTCCTGTTTTGCCTGCAAAACCACAATCAAACGAATTAGTCGACGCCTGGTCGGTCAAGCCGGCCGATCCTTGGAAGCAACCATCACAACAGCAACCACAACAAGTGCCTGATCCATGGAATTCAAAGACTTCAAGTGAACCGCTCGATCCGTGGGCTCCGATTGGCAACAGCCAAGCCAGCGGCTTTCCAGCACCGGTAGCGGCACCTCGCCAAACGACTAGCGCACTCGGAGGCCTCACGCCCGGATCAGACTTGGACGAGTTCGACATCATTACGAATCGCAGTAAATCGGCCCAGCAAGCGACCTCGTCACCCGTCAACGATTTGCTGAATCGTCAGAACAACAACAACTTGAATGACTTACTCGCCGACATGGATCCACTTGCTCCGAAAAAGTCCGTCACGACGACGTCATCGACGACGGGGGCGGTAGCAAAGAACAATCCCGCAGCTTTTCTCGGCGAGAACTCGGCCCTCGTCAATTTGGACAACTTGATAAAGCCAATCAATACAACCAGTAATAATAACGCATACAATCCATTCAGCGACTCGCCAGCAATGAAAAAGAATTTATTCCATCAGAATCAACCTCAGAACCCGTCCATGAATCAGTTGAAACAGCAGCAGCAGTTCCAAGTCGCGCCCCTTTCAACAGCACCGCAGCAGCCGCAAGATCCGTGGGCGCCAGTTAACAACAACGATGCGAACCAGCAGTCAAATGTATTAGTCACGGATAGTGACAATGGTGACATAATCAATAATAATCTCATTTTTAAAATCGATTACGATATGACGGATTGCGCGAATGAAAGCACGACTGATGTCGATGAGGTGTTCAATACGAGCTATGTTGAGTCCTCATTCGAATCAGCTGCAGACTTTAGCAAAAGCCTAAACGACATTCGCGATCATGAGAACGATAATATTCCAATGCGACCTAACTCACTCGCGTTTTGTGCGGATGACAGTTTCACATACTCATGTAATAATGTCAATAACAATGATCAGAATAACACCATTAATAATAACAATATTGGATGGATGAACCCAAATCAATCAAATCCGTTTCTG
Protein: 713 (aa)
MQMNVAGLRRNIKNLAHNYSDAQVKVREATSNDPWGPSSTLMAEIADLTYNVVAFSEIMQMIWKRTNDHGKNWRHVYKALLLLEYLIKTGSEKVAQQCKENIFSIQTLKDFQHLEEGKDQGVHVREKAKQLVILLKDDERLKAERARALKAKERFARTASGFGSDGSIDGPSRDRDTPVWPESDRRSVNDTEFVRPQTVGEEELQLQLAIAMSKEEAEQEESKRRSDDVRLQLALSQSEQDFKKQSDKKPEGTLVDLLGDISFGGAVGGVPSPPPQQDPWGLPQPQPRATGNDMWSSKPDPWLPPPPMSNGASASAFSALASEPSLGARTKSPAGNSSSSIEGWLQTVPPPTSNAVPVLPAKPQSNELVDAWSVKPADPWKQPSQQQPQQVPDPWNSKTSSEPLDPWAPIGNSQASGFPAPVAAPRQTTSALGGLTPGSDLDEFDIITNRSKSAQQATSSPVNDLLNRQNNNNLNDLLADMDPLAPKKSVTTTSSTTGAVAKNNPAAFLGENSALVNLDNLIKPINTTSNNNAYNPFSDSPAMKKNLFHQNQPQNPSMNQLKQQQQFQVAPLSTAPQQPQDPWAPVNNNDANQQSNVLVTDSDNGDIINNNLIFKIDYDMTDCANESTTDVDEVFNTSYVESSFESAADFSKSLNDIRDHENDNIPMRPNSLAFCADDSFTYSCNNVNNNDQNNTINNNNIGWMNPNQSNPFL
| Type | Start | End | Length |
| CDS |
21568 |
21627 |
60 |
| CDS |
22441 |
22737 |
297 |
| CDS |
22830 |
22949 |
120 |
| CDS |
23019 |
23429 |
411 |
| CDS |
23500 |
23880 |
381 |
| CDS |
23937 |
24737 |
801 |
| CDS |
24939 |
25007 |
69 |
| intron |
21628 |
22440 |
813 |
| intron |
22738 |
22829 |
92 |
| intron |
22950 |
23018 |
69 |
| intron |
23430 |
23499 |
70 |
| intron |
23881 |
23936 |
56 |
| intron |
24738 |
24938 |
201 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_001843362 |
liquid facets [Culex quinquefasciatus] gb|EDS32225.1| liquid facets [Culex quinquefasciatus] |
1e-169 |
| InterPro |
IPR001026 |
Epsin domain, N-terminal |
|
| InterPro |
IPR013809 |
Epsin-like, N-terminal |
|
| InterPro |
IPR003903 |
Ubiquitin interacting motif |
|
| InterPro |
IPR008942 |
ENTH/VHS |
|
| Pfam |
PF00790.14 |
VHS domain |
0.0021 |
| Pfam |
PF07651.11 |
ANTH domain |
6.5e-07 |
| Pfam |
PF02809.15 |
Ubiquitin interaction motif |
2.2e-06 |
| Pfam |
PF01417.15 |
ENTH domain |
2.2e-49 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| H. sapiens |
ENSP00000459678 |
| P. humanus |
PHUM082810-PA |
| S. invicta |
SI2.2.0_02107 |
| N. vitripennis |
NV14493-PA |
| B. mori |
BGIBMGA005700-TA |
| H. sapiens |
ENSP00000378982 |
| H. sapiens |
ENSP00000378980 |
| T. castaneum |
TC005393 |
| P. vanderplanki |
Pv.04416 |
| D. melanogaster |
FBgn0028582 |
| H. sapiens |
ENSP00000320543 |
| H. sapiens |
ENSP00000459542 |
| A. gambiae |
AGAP007396 |
| A. aegypti |
AAEL009088 |
| C. quinquefasciatus |
CPIJ002094 |
| M. musculus |
ENSMUSG00000001036 |
| H. sapiens |
ENSP00000378990 |
| H. sapiens |
ENSP00000378988 |
| A. mellifera |
GB16241-PA |
| H. melpomene |
HMEL013363-PA |
| D. plexippus |
DPOGS209378PA |
| H. sapiens |
ENSP00000261495 |