MidgeBase gene description page [Pn.14316]
Outline
| Gene ID | Pn.14316 |
| Type | Protein coding gene |
| Scaffold | PnScaf23619 |
| Start | 39800 |
| End | 47843 |
| Direction | + |
Sequence
Transcript: 2310 (bp)
ATGTCAGCATCTCATAAAATTCGAAAATTTTCCATTTATTTCTGGTTGACAATCGGCAGAGTCATTGGATTACTTTTTGTAACGCTAAATGGATGGGAATTTCATACGATCCGCTTCTATCGCGTCTACAGTCGAGTAATTCAATTTGCGCTGATTTTTCTCTTTCCCTTTGCATATTTGCGCTTTTTGGAGCACATCATTGTAGTGGAGAACTTTGACATGTCTTTCATTAAATTGGTGTCAGCACTGCGCGATTTCATGGACTATTTTTGCATGATTTTCGCCTTCCTCGCGGCCAATTTCAATCGCTTCAATCTATGCGATACCCTCAACGAAATAATTCGCTTTAATAGATTCTGTCGCGACAACTTTAGCATATACGCGAGGAAGATGGACATAAATTGCTTCGACTGTGTCAGCATAAGCATCATGAGCAAATTTATGGTGTTTATCATGCACGCTGTTCTCTATGTGACAACAATAAATGTTTTTTCACTCAACGCGCTCATCGTCTTTCCCGTGCTGCTTCCCGAGCTCTGCTATTTCGTCGTCAATATTCAATACTTTGCCGGCATAATGATATTAAAGTTCCACATCAAAAACATCCGTCGAATTCTGAAGGGTGTCGAGCGCGACATCAGATTCAACGCCACTGATAAATGCCATCGAAAGCTGAGAACTCTCGAGCGCGATTTATTAGCGAGCGAGCAAATCGATAAGGTCTCCGAGATGCACACGAAGCTCTTCAGCATTTACCGGAATTTTACGAGCATGTATCAATTTCAAATGCTGCTATCGATGACATCCAACTTTTTCGCCCTAATGATCAATACATTCTACATATACGTGGTGTACCTGCTCACGAGCTTGAATTTCGTCTCCGAACACGGAACGCAGCTGCAAATCATTTCGGCGCTCTGCATTGTCGCGCGCGTCTTCGATACGCACTTCAATTTGAAGAACACGTCTGACACTAATGGCCTGGACGAAAGAAATCAACGACTTGCCAGCGAGCTGAGCTGTTATGGCAAGGAAAAGCGGCTGAAGGACAGTGTCTATCTACAACCTGTGCCTTCAGCTGAAGCAGGAGCGAATTTCGATAATGTTACCAGCAGCTCGCCGGAGGGAGGCGTCGAGTTGATTAAGAAGTTGTATAAACAGTGCATGCTACTGGGCTTGTCGATAAACACCACCGCGGAGTCTCCTCCACAATGTCCCGTGATATTTGATGGCTTTTACTGTTGGGGGCCGACCCGAGCAAATACCACCGAGTACAAGGCATGTCCGAGTTATGTAATTGGATTCAATGGCAATGCAATAGCCTCCAAAACATGTACCGAAAACGGAACTTGGTTCCGACATCCCGACACTGGCCAAGCGTGGAGCAATTACACAAAGTGTATCGATCACGAGGATTACAGCTTTCGCCAAACCATTAACGATATTTATTTCTACGGTTATTGCATCTCGCTCTCGACACTCGTCATTTCATTAATTATATTCCTTAGTTTTAGGTCATTAAAGTGCACGAGAATCCGAATACATGTGCAATTATTCATCTCGTTAGCGCTGAGCTGCATTTTATGGATTGTTTGGTACAAATTTATTATAATTGATCCCAATATAGTGAAAGAGAACTCTCTCTGGTGCATCGGTCTTCACATTGTGCTGCAATATTTGATGATATGCAATTACTTCTGGATGTTCTGCGAGGGTCTCCACTTACATCTCGTACTCGTCGTTGTTTTCATTAAGGATAAGGTTGCGCTGCGAATATTCCTCATCATTGGATGGCTGTTGCCACTGCTAATCATATGCACATATAGCTTGTTGCGAGCGTGGCACATCGATGACAATAACTTATGCTGGATCGAGGAGAGTCACTTTCAGTGGATTCTCACAATTCCCGTCTTAATCTCCTTTGTTTGCTCAATTATCTTCCTCGTGAACATCGTTCGAGTTTTAATTACGAAATTACATCCGAAGTCAGCAGCACCGCCACCATTGGCAATAAAGAAGGCTGTTCGTGCGACGTTAATTCTAATTCCGCTGTTTGGCTTGCAGCACGTTCTCATTCCTTTTAGGCCCGAAAAGGGCTCCCCGCTCGAGAGCGTCTACCATATCGTGTCGGCCGTTATCATAAGTCTGCAAGGATTGTGCGTGTCGTGTCTTTTCTGCTTCGCCAATCACGAGGTCATTACCGCCGTTCTGAGCTATCTCAACAATCTCTTTCCCATGCTGTTCAAGACGTCCTCGCGCGAGAGCTACAACAATCTCGGCCAGCCGACGACGACACGCGACATTGTTTTG
Protein: 770 (aa)
MSASHKIRKFSIYFWLTIGRVIGLLFVTLNGWEFHTIRFYRVYSRVIQFALIFLFPFAYLRFLEHIIVVENFDMSFIKLVSALRDFMDYFCMIFAFLAANFNRFNLCDTLNEIIRFNRFCRDNFSIYARKMDINCFDCVSISIMSKFMVFIMHAVLYVTTINVFSLNALIVFPVLLPELCYFVVNIQYFAGIMILKFHIKNIRRILKGVERDIRFNATDKCHRKLRTLERDLLASEQIDKVSEMHTKLFSIYRNFTSMYQFQMLLSMTSNFFALMINTFYIYVVYLLTSLNFVSEHGTQLQIISALCIVARVFDTHFNLKNTSDTNGLDERNQRLASELSCYGKEKRLKDSVYLQPVPSAEAGANFDNVTSSSPEGGVELIKKLYKQCMLLGLSINTTAESPPQCPVIFDGFYCWGPTRANTTEYKACPSYVIGFNGNAIASKTCTENGTWFRHPDTGQAWSNYTKCIDHEDYSFRQTINDIYFYGYCISLSTLVISLIIFLSFRSLKCTRIRIHVQLFISLALSCILWIVWYKFIIIDPNIVKENSLWCIGLHIVLQYLMICNYFWMFCEGLHLHLVLVVVFIKDKVALRIFLIIGWLLPLLIICTYSLLRAWHIDDNNLCWIEESHFQWILTIPVLISFVCSIIFLVNIVRVLITKLHPKSAAPPPLAIKKAVRATLILIPLFGLQHVLIPFRPEKGSPLESVYHIVSAVIISLQGLCVSCLFCFANHEVITAVLSYLNNLFPMLFKTSSRESYNNLGQPTTTRDIVL
| Type | Start | End | Length |
| CDS |
39800 |
40856 |
1057 |
| CDS |
40927 |
40968 |
42 |
| CDS |
45863 |
45961 |
99 |
| CDS |
46027 |
46059 |
33 |
| CDS |
46120 |
46310 |
191 |
| CDS |
46378 |
46469 |
92 |
| CDS |
46551 |
46898 |
348 |
| CDS |
47301 |
47374 |
74 |
| CDS |
47467 |
47840 |
374 |
| intron |
40857 |
40926 |
70 |
| intron |
40969 |
45862 |
4894 |
| intron |
45962 |
46026 |
65 |
| intron |
46060 |
46119 |
60 |
| intron |
46311 |
46377 |
67 |
| intron |
46470 |
46550 |
81 |
| intron |
46899 |
47300 |
402 |
| intron |
47375 |
47466 |
92 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_002010959 |
GI16272 [Drosophila mojavensis] gb|EDW05801.1| GI16272 [Drosophila mojavensis] |
1e-111 |
| InterPro |
IPR017981 |
GPCR, family 2-like |
|
| InterPro |
IPR017983 |
GPCR, family 2, secretin-like, conserved site |
|
| InterPro |
IPR000832 |
GPCR, family 2, secretin-like |
|
| InterPro |
IPR013604 |
7TM chemoreceptor |
|
| InterPro |
IPR001879 |
GPCR, family 2, extracellular hormone receptor domain |
|
| Gene Ontology(BP) |
GO:0050909 |
sensory perception of taste |
|
| Gene Ontology(BP) |
GO:0007186 |
G-protein coupled receptor signaling pathway |
|
| Gene Ontology(BP) |
GO:0007166 |
cell surface receptor linked signaling pathway |
|
| Gene Ontology(CC) |
GO:0016020 |
membrane |
|
| Gene Ontology(CC) |
GO:0016021 |
integral to membrane |
|
| Gene Ontology(MF) |
GO:0004888 |
transmembrane signaling receptor activity |
|
| Gene Ontology(MF) |
GO:0004930 |
G-protein coupled receptor activity |
|
| Pfam |
PF02793.17 |
Hormone receptor domain |
1.4e-12 |
| Pfam |
PF00002.19 |
7 transmembrane receptor (Secretin family) |
9.9e-56 |
| Pfam |
PF08395.7 |
7tm Chemosensory receptor |
3.6e-14 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| A. gambiae |
AGAP009770 |
| H. sapiens |
ENSP00000377959 |
| H. sapiens |
ENSP00000389295 |
| D. plexippus |
DPOGS200896PA |
| H. melpomene |
HMEL004721-PA |
| H. sapiens |
ENSP00000387190 |
| C. quinquefasciatus |
CPIJ014419 |
| M. musculus |
ENSMUSG00000059588 |
| H. sapiens |
ENSP00000386972 |
| A. aegypti |
AAEL006490 |
| H. sapiens |
ENSP00000353385 |
| D. melanogaster |
FBgn0030437 |
| S. invicta |
SI2.2.0_12935 |
| M. musculus |
ENSMUSG00000023964 |
| P. humanus |
PHUM428070-PA |
| H. sapiens |
ENSP00000399552 |
| D. plexippus |
DPOGS205719PA |
| H. sapiens |
ENSP00000376177 |
| N. vitripennis |
NV14697-PA |
| P. vanderplanki |
Pv.15203 |
| T. castaneum |
TC013321 |
| H. sapiens |
ENSP00000413179 |
| A. aegypti |
AAEL010043 |
| H. sapiens |
ENSP00000391369 |
| S. invicta |
SI2.2.0_12845 |
| T. castaneum |
TC002694 |
| P. vanderplanki |
Pv.15583 |
| D. melanogaster |
FBgn0052843 |
| C. quinquefasciatus |
CPIJ011559 |
| A. gambiae |
AGAP001175 |
| A. mellifera |
GB12975-PA |
| B. mori |
BGIBMGA009927-TA |
| H. sapiens |
ENSP00000352561 |
| P. vanderplanki |
Pv.14576 |