MidgeBase gene description page [Pn.14312]
Outline
| Gene ID | Pn.14312 |
| Type | Protein coding gene |
| Scaffold | PnScaf23619 |
| Start | 21833 |
| End | 22452 |
| Direction | + |
Sequence
Transcript: 495 (bp)
ATGGAAATGGTTCCAACTTTATCGAATTCAAAATCGGGACAACTGATTAAGTGCGAAATAGATGAACAGGGAGTGGTGTCATTTGATTTGGAGCAATTTCAGATTCCAACAGTGAAGAATATCAACCCTAAAGAGAGACAAGCAAATACACGAGCAATTGAGAAGCAACGCAGAGATCAGCTGCGAGATTTGTTCAATCATTTGAAATCTTTGATTCCCGGCCTGGATCCTAATACGAAAACCGGAAGAGCAACCATTCTGAAAGAAACTATCGACTACATTCAAGACTTGCAGCGCAAAATACTGGAAATGAACGTCGACATCGATACAGTAGTCATACAAAATCAGCAACTTCAACAAGAAAATATTTTACTCAAAAGCTTCGATTATGACTACGCACTACATGGTGAAGTAGAAATGAAGGAAGACGAGGACGGGATAAAAAAGGAGGAAGATGAGGAAACATTAGACGAGGAAGAAATTTTCGTTGACATT
Protein: 165 (aa)
MEMVPTLSNSKSGQLIKCEIDEQGVVSFDLEQFQIPTVKNINPKERQANTRAIEKQRRDQLRDLFNHLKSLIPGLDPNTKTGRATILKETIDYIQDLQRKILEMNVDIDTVVIQNQQLQQENILLKSFDYDYALHGEVEMKEDEDGIKKEEDEETLDEEEIFVDI
| Type | Start | End | Length |
| CDS |
21833 |
21836 |
4 |
| CDS |
21904 |
22263 |
360 |
| CDS |
22319 |
22449 |
131 |
| intron |
21837 |
21903 |
67 |
| intron |
22264 |
22318 |
55 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
NP_649097 |
Max [Drosophila melanogaster] sp|P91664.1|MAX_DROME RecName: Full=Protein max; Short=dMax; AltName: Full=Myc-associated factor X gb|AAB39841.1| transcription factor dMax [Drosophila melanogaster] gb|AAF49179.1| Max [Drosophila melanogaster] gb|ABF17902.1| FI01032p [Drosophila melanogaster] |
6e-08 |
| InterPro |
IPR011598 |
Helix-loop-helix DNA-binding |
|
| Pfam |
PF06276.7 |
Ferric iron reductase FhuF-like transporter |
0.0079 |
| Pfam |
PF00010.21 |
Helix-loop-helix DNA-binding domain |
3e-14 |
| Pfam |
PF10224.4 |
Predicted coiled-coil protein (DUF2205) |
0.056 |
| Pfam |
PF06005.7 |
Protein of unknown function (DUF904) |
0.31 |
| Pfam |
PF04977.10 |
Septum formation initiator |
0.18 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes