MidgeBase gene description page [Pn.14232]
Outline
| Gene ID | Pn.14232 |
| Type | Protein coding gene |
| Scaffold | PnScaf23164 |
| Start | 2234 |
| End | 3371 |
| Direction | + |
Sequence
Transcript: 774 (bp)
ATGAAGTTGCTTCTGCTGGCAGTCTCCCTCTTCGCCGCTTCAGCCTGCGCTGGCGAATTCGCTGAAGTCGACTGGTCGCAGGTGCTGCCGCGTGAAGACGAGCCCGGTTTTTGGGACAACCGCGATGAAGGCCTTCGACCACTGCCGCTCAGCGTGCGATCGCGCAGAATTATCGGCGGTTGGGAAGTCGAGCCCAACAGCCATCCATATGCCGTTTTCTTGCTGATGACTGCGGGCAGCGGTGCTTTCAGGTGCGGAGCTTCAGTAATCGGAACGCGCGCAATTCTCACGGCTGCGCATTGCCCGGTGGGCACAACATCGACCATAGCCACGGCCGGCGCGCACAACATCCAGGTCATCGAGCCGAGCCAGCAGCGACAAACGATCCTCTCGTCCGCCTACCGCATCCACCCGAACTACAACTCGCGAACTCTGGCCAACGACATCGCCATTCTGATCGCGCCGAGCGACTACGTCGAGACGGCGCAAGTGCGCTTCTCGCGCCTCCCCACCGAGTTCCGCAACGAGCTCTTCACCGGCGAGCTGGTGTCGATTGTCGGCTGGGGCCGCACGTGCGTCACCTGTCCCGGCTCCGACGTCCTGCGCGGCGTCCAGAACTACATCATCACGAATGCCGAGTGCAGGGCGGTGTACGGCAGCACCGTGACCGACCAGTTCTTCTGCATGCAGACGACCGGGCAGCGCGGCACTTGCCCCGGCGACTCCGGTGGCCCCTACACGTTGCCGCGTGTCGGTTCGCCCGACCAGCTCCAG
Protein: 258 (aa)
MKLLLLAVSLFAASACAGEFAEVDWSQVLPREDEPGFWDNRDEGLRPLPLSVRSRRIIGGWEVEPNSHPYAVFLLMTAGSGAFRCGASVIGTRAILTAAHCPVGTTSTIATAGAHNIQVIEPSQQRQTILSSAYRIHPNYNSRTLANDIAILIAPSDYVETAQVRFSRLPTEFRNELFTGELVSIVGWGRTCVTCPGSDVLRGVQNYIITNAECRAVYGSTVTDQFFCMQTTGQRGTCPGDSGGPYTLPRVGSPDQLQ
| Type | Start | End | Length |
| CDS |
2234 |
2528 |
295 |
| CDS |
2831 |
3308 |
478 |
| CDS |
3368 |
3368 |
1 |
| intron |
2529 |
2830 |
302 |
| intron |
3309 |
3367 |
59 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_001866122 |
trypsin-3 [Culex quinquefasciatus] gb|EDS42906.1| trypsin-3 [Culex quinquefasciatus] |
1e-37 |
| InterPro |
IPR009003 |
Peptidase cysteine/serine, trypsin-like |
|
| InterPro |
IPR001314 |
Peptidase S1A, chymotrypsin-type |
|
| InterPro |
IPR001254 |
Peptidase S1/S6, chymotrypsin/Hap |
|
| InterPro |
IPR018114 |
Peptidase S1/S6, chymotrypsin/Hap, active site |
|
| Gene Ontology(BP) |
GO:0006508 |
proteolysis |
|
| Gene Ontology(MF) |
GO:0004252 |
serine-type endopeptidase activity |
|
| Gene Ontology(MF) |
GO:0003824 |
catalytic activity |
|
| Pfam |
PF00089.21 |
Trypsin |
1.5e-37 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| P. vanderplanki |
Pv.07383 |