MidgeBase gene description page [Pn.14216]
Outline
| Gene ID | Pn.14216 |
| Type | Protein coding gene |
| Scaffold | PnScaf23095 |
| Start | 2586 |
| End | 6419 |
| Direction | + |
Sequence
Transcript: 2943 (bp)
ATGGTTATAGAAAGTGAAGATCAAGCGACACAAGTCATGGAACAGGATGAGCATCAAACTGCGTCGGAAGATTTACCTACATCATTGTGGATGATAAAAATTAAGGCAACCGAGCTCTTTCCCAAAGAAAAGGCAGAACGTGAAGAAGATAGCTTACAAATATCGTTTACTGAGTGCCCTGGTGAATCAGTTAAATATATAGGAAAGTATAATGAGCATGGAAAGTTGGCGATATCGAATTATCGTCTCTATTTATCAAACTCTGCAAAGTCATTTGAAACCTCAATACCATTGCGTCTTATCGAAAATGTAGCAATTAAGGAGATGTTTCAGATAGTGATTAGCTGCAAAGATGCATGCACATACGTGTGCTCATTTTCAACAAATGAATTGTGCAATGAATGGCATGCCCGAATTAGCGCTGCAGCCGGTGTTCCTGAGCAATTGGAAAACTTATTCGCATTTCCTTTTCATGCGTGGGTCTCCGAGTTGGAGTCGCTCGATCACGAATGGTCGAATCGCTTGCAACACGCTACAAGTTACGACGAGTATTTTCAACTTGAACTAGAGCGTTTAAAATTTGATTTGAAAGGAGCATGGCGAGTGTCAAATATTAACTCTGAATTCAAGTTATGTGTTTCGTACCCTAAACAACTGATTGTTCCTGCGTGTATCTCCGACGAAACTCTTACATCTGTTGCAACCTTTCGCAGTTCGAAGCGTATTCCAGTCGTAACTTATCGACATCCCTCGGGTGCCGTAATCGCTCGATCGTCTCAGCCTGAGGTTGGCTGGCTTGGATGGCGGAACAACAAGGACGAGCAACTGTTGAAGGCACTCGCTGATGCATGCTCTTTTGATAACGGAAAAATAAGTAAAGAAGGAGACAGCGATCACTCTTTCGACACGTCACAAACGGAAAATATAGAGCTGGATAAACCTAAGAAAATTTTGATTGTTGATGCTCGCAGTTACGCTTCAGCAGTTACAAATCGAGCACGAGGCGGTGGAGTGGAATGCATTGAGTACTATCCCTCAGCTGAAATTGAGTTCATGAACCTTGGTAATATCCACGTAATTCGAAAATCGTTCCAAAGTCTAAGGCAGTTGTGTGCGCTTGACGCCGATATTCCGAACTGGTTCAGTCTTCTGGAAAAGACGAATTGGTTGCAGCATATCTCTGGCTTATTGTCCGCTTCAAATATTGTTTGTCACGCGATTGAGAAAAACAATCGTCCCGTTCTAATTCACTGCTCAGATGGCTGGGATAGGACGAGTCAAATTTCGAGCATGTCTCAGATTATGTTGGATCCTTTTTATCGAACTATGGAAGGCTTCAAAATTTTGGTCGAGAAGGAATGGCTAGCGTTTGGTCATAAGTTTGGCGATAGAGTTGGTCACGGAGTAGGAAGCGATGATACAAACGAACGATGCCCTATATTCTTGCAGTGGATAGATTGCATTCATCAAATTCATAATCAATTTCCTTGTAGTTTCGAGTTTTCTACATCTTATCTTATAAAACTAGCACAGCACGTGCATTCCTGTTTGTTCGGCACTTTTTTGTGCAATACACTGAAGGAGCGAATTGAAAATTCCGTAGGGGATCGTACATTTTCGGTGTGGCCTTTCCTGTCGACGTCCATTTACAAGAATCCATTGTACCAGCCAAATCGAGACAAAGTATTGTGGCCGTCGCACAGCATTCGGGACCTTCGTTTCTGGAAAGAATTGTATGGCGGCTTTAGTTTTAGTTTTCATACGCCGAATGCTACAAATGGTAACCATGAAATATCAAACGATGCAATTTATTCCGAAAATGGATTGACGAAGACAAGGAGCTTTGGCGATTTGGTGTCCGAACTCAAGAGTAAAGATTCTGTGCGACGACTTAGTGATCCCTCAATAGTATTTGCCGATAGCAACAGCATCTCATTGCACTCGAGAGGCATTTTTCAAGAGTCATGTGACAGTACTAACAACTGCATAAATGATCAACTCATTGAAGAATGCGAGAATAGTAATAGTAATCGAATTCATGTGCTAAGTACAAACGTGGATACTAGTGATAGGAAAAATTCCAAAAGCACTCTGAAGGAAGATGTACATGATGAGGACAATGAGAACATTTTCCACGTCCGAAAAAATGATGATAGCAATGACGACGATGATGAAGAACGTGTACGAATCAAGGAAGACTCTAGAGATGAAATTGATGGACATAAGATGAATTCTGAAGAGTTGACTGATACGCTTGAAAGTTTGGAACAGCAACAGCTACAGTATCAGCTACAGCATCATTTAAGAAAGATAAAATTATCACATTTTCAAAATGGGCATTCAAAAGTAAAGAAAGAAAGCACATCGTCAAATGATTCGCAATTTTCGACACCGGCTCTTCGCTCAACGACACCCGCAAACTTTGAAAAGACTATTTTTTTAATGGATGGACTTTCACATGCTCTTAGTCAGGATAATTTGCGACTACAGCAACTGGTGCACGAGCATAAACTAAAGGAAGAAGCACTCCAGAATGAGATTCATACCATGAGACTGGCGTTATTAAAAACCACGTCGTGTCAATGTAGTCGTTATCATAGCAATAACGGCAAATCGCATAGTGCAAATGCGTCAGATGACCCACATCAAGAATATAATTCCGAAAATTCCGTATGCTCATGGGAAGCAGTTGACGAGAAAACGGCACCGCACGGCGGAGGAAATCATCTTCCATGGATACCCGACTTTGCACGAACCAAGTGCAAGAACTGCCAGATAGAATTTTGGCTAGGAAGGAGAAGACATCACTGTCGTCTCTGCATGGACATTTTCTGTGGAGACTGCTCTGACAATTTTGCTCAGTTGCCAAACAACGAAAACTTTCAACCTCCTGTGCGATTGTGTGAAACTTGCTTCAAATCTATATCCGAGAAGGAAACAGCT
Protein: 981 (aa)
MVIESEDQATQVMEQDEHQTASEDLPTSLWMIKIKATELFPKEKAEREEDSLQISFTECPGESVKYIGKYNEHGKLAISNYRLYLSNSAKSFETSIPLRLIENVAIKEMFQIVISCKDACTYVCSFSTNELCNEWHARISAAAGVPEQLENLFAFPFHAWVSELESLDHEWSNRLQHATSYDEYFQLELERLKFDLKGAWRVSNINSEFKLCVSYPKQLIVPACISDETLTSVATFRSSKRIPVVTYRHPSGAVIARSSQPEVGWLGWRNNKDEQLLKALADACSFDNGKISKEGDSDHSFDTSQTENIELDKPKKILIVDARSYASAVTNRARGGGVECIEYYPSAEIEFMNLGNIHVIRKSFQSLRQLCALDADIPNWFSLLEKTNWLQHISGLLSASNIVCHAIEKNNRPVLIHCSDGWDRTSQISSMSQIMLDPFYRTMEGFKILVEKEWLAFGHKFGDRVGHGVGSDDTNERCPIFLQWIDCIHQIHNQFPCSFEFSTSYLIKLAQHVHSCLFGTFLCNTLKERIENSVGDRTFSVWPFLSTSIYKNPLYQPNRDKVLWPSHSIRDLRFWKELYGGFSFSFHTPNATNGNHEISNDAIYSENGLTKTRSFGDLVSELKSKDSVRRLSDPSIVFADSNSISLHSRGIFQESCDSTNNCINDQLIEECENSNSNRIHVLSTNVDTSDRKNSKSTLKEDVHDEDNENIFHVRKNDDSNDDDDEERVRIKEDSRDEIDGHKMNSEELTDTLESLEQQQLQYQLQHHLRKIKLSHFQNGHSKVKKESTSSNDSQFSTPALRSTTPANFEKTIFLMDGLSHALSQDNLRLQQLVHEHKLKEEALQNEIHTMRLALLKTTSCQCSRYHSNNGKSHSANASDDPHQEYNSENSVCSWEAVDEKTAPHGGGNHLPWIPDFARTKCKNCQIEFWLGRRRHHCRLCMDIFCGDCSDNFAQLPNNENFQPPVRLCETCFKSISEKETA
| Type | Start | End | Length |
| CDS |
2586 |
2597 |
12 |
| CDS |
2899 |
3061 |
163 |
| CDS |
3173 |
4255 |
1083 |
| CDS |
4326 |
4338 |
13 |
| CDS |
4410 |
4494 |
85 |
| CDS |
4561 |
5564 |
1004 |
| CDS |
5633 |
5783 |
151 |
| CDS |
5853 |
5984 |
132 |
| CDS |
6048 |
6195 |
148 |
| CDS |
6265 |
6416 |
152 |
| intron |
2598 |
2898 |
301 |
| intron |
3062 |
3172 |
111 |
| intron |
4256 |
4325 |
70 |
| intron |
4339 |
4409 |
71 |
| intron |
4495 |
4560 |
66 |
| intron |
5565 |
5632 |
68 |
| intron |
5784 |
5852 |
69 |
| intron |
5985 |
6047 |
63 |
| intron |
6196 |
6264 |
69 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_001648675 |
myotubularin [Aedes aegypti] gb|EAT48392.1| myotubularin [Aedes aegypti] |
0.0 |
| InterPro |
IPR003595 |
Protein-tyrosine phosphatase, catalytic |
|
| InterPro |
IPR017906 |
Myotubularin phosphatase domain |
|
| InterPro |
IPR010569 |
Myotubularin-related |
|
| InterPro |
IPR016130 |
Protein-tyrosine phosphatase, active site |
|
| InterPro |
IPR000306 |
Zinc finger, FYVE-type |
|
| InterPro |
IPR017455 |
Zinc finger, FYVE-related |
|
| InterPro |
IPR013083 |
Zinc finger, RING/FYVE/PHD-type |
|
| InterPro |
IPR011011 |
Zinc finger, FYVE/PHD-type |
|
| Gene Ontology(BP) |
GO:0016311 |
dephosphorylation |
|
| Gene Ontology(MF) |
GO:0046872 |
metal ion binding |
|
| Gene Ontology(MF) |
GO:0004725 |
protein tyrosine phosphatase activity |
|
| Gene Ontology(MF) |
GO:0016791 |
phosphatase activity |
|
| Pfam |
PF13849.1 |
Myotubularin Y_phosphatase-like |
2.4e-30 |
| Pfam |
PF00102.22 |
Protein-tyrosine phosphatase |
0.00034 |
| Pfam |
PF13350.1 |
Tyrosine phosphatase family |
0.005 |
| Pfam |
PF06602.9 |
Myotubularin-related |
3.5e-45 |
| Pfam |
PF00831.18 |
Ribosomal L29 protein |
0.11 |
| Pfam |
PF01363.16 |
FYVE zinc finger |
2.5e-18 |
| Pfam |
PF00782.15 |
Dual specificity phosphatase, catalytic domain |
0.014 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| H. sapiens |
ENSP00000318070 |
| H. sapiens |
ENSP00000384077 |
| H. melpomene |
HMEL003561-PA |
| N. vitripennis |
NV16261-PA |
| M. musculus |
ENSMUSG00000034354 |
| H. sapiens |
ENSP00000307271 |
| B. mori |
BGIBMGA013250-TA |
| M. musculus |
ENSMUSG00000018401 |
| D. plexippus |
DPOGS212740PA |
| A. gambiae |
AGAP001604 |
| H. sapiens |
ENSP00000464067 |
| P. vanderplanki |
Pv.02991 |
| A. aegypti |
AAEL000564 |
| S. invicta |
SI2.2.0_00661 |
| H. sapiens |
ENSP00000325285 |
| C. quinquefasciatus |
CPIJ007313 |
| D. melanogaster |
FBgn0030735 |
| T. castaneum |
TC015545 |
| H. sapiens |
ENSP00000384651 |
| H. sapiens |
ENSP00000331649 |
| A. mellifera |
GB18689-PA |
| P. humanus |
PHUM607650-PA |