MidgeBase gene description page [Pn.14213]
Outline
| Gene ID | Pn.14213 |
| Type | Protein coding gene |
| Scaffold | PnScaf23093 |
| Start | 4827 |
| End | 7638 |
| Direction | - |
Sequence
Transcript: 2724 (bp)
ATGGGTGTAACAAAACAATATCTTCGATATAAACCGGCTGGAACGTTCAACATCATAGCTAGCTCACGAGTTAATGGTGTTTTTATTGATTTAAATGAAACAAGCGGACGATACATTGCAACTGGAGCAGCAGAAAATATTCTCATATGGGACCTAAGAACCGGTGAAAAAGTCTGTGAACTAAATCGCGATAAGGAAGAAGTGACATGCTTGAGAAGTTTAGGAAACAAAATTGCCGCCGGATATGTAGATGGAAACGTTGTAGTCTTCAATATCGACACAAAAGCCGCCGAATGTATGTTCACTCCTCACAAATCGGCAGTAACGTGCCTTCAATTCGACAGCGAAGGAATAAATTTGGTGAGCGGCAGCTTAGACACCGACTGTGTTGTTTCTGATCTCGTAGATCAAGTAGGAAAATACAGACTTAGCGGACACTCTGGGCCAATAACTGCCTGTCACTTCCTCGAGACGTACAAAAATACCATCATCACAAGCTCGCGAGACATGCAAATAAAATTCTGGAATATTGAGACACAATTTTGCTTTAAGACTCTTGTCGATAACACTTCTGAAGTTTGGGGACTTTCGCTGCTGCGAAATGAAACTTTTCTGGTGACGGGCTCAAAAGAAACGGTTCTACGAGTGTACAAGCTGTTGGAAAACAAATCACACACAGAGAATTCGACCACTTCTAATGCTATCTTTTCGGACGACGACTCTATAAGTCCACTGAAGTGCAACTTTGTCGGCTTCATACAGAGAACTGGCAAGGGGAGGACAATGAACTTGATGACAGATGTTGAGGGTCAGATTTTAGCATGCAGCGGCACAAACGATGAAATAGAACTCTTCTACTTCAACTCGAGGGAGGAATCGATGAAACGACTATCAAAGCGCATGAAAAAGTTATCCGTTAAGAAGAAGGAGGAGGGAAATGAAGAAGCAGATCACAGCAGTGACATAACTCTGAGCGACGAAATCAAGAGAATCGGTTCAATAAAGACCAAGGACAGAGTAAAATCGATCGACATACTTCTGAGCGCAACAGGTGAGCTACGAGTGAGCGTCGTTTTCGGAAGCAATTTGATTCGCCTCTACAGCATAAACACCGCACAGAAGAACCCTGAACCTCTATTGCTTCGTTCAATTGCTCAGCAAGGCCATCACACTGAATGTCGTAGCGTGTGCTTTAGTTCTGATAATCTCGCAATCGCATCTGGCAGCGGAGACTCGTTAAAGCTGTGGAATCGAACAAGTCTGGCGTGCTTGAGAACTATCGAGACTGATTACATTCTTTCGACATGCTTCGTTCCCGGTGACAGACATGTCTTGCTTGGAACCAAGAAGGGCTTTCTGGTGATTGTGGACATCGTCGTTGGCGAGATAATCGAGTCCATTCAAGCACACGAGAAGGAATTGTGGAGTGTTAGTCTTGCGCCAAATTTAAGGAGCTGTGTGACGGGCGGAGGCGATAACACAGTAAAGTTTTGGTCGTTTGAACTCATTCCCGATCCAAATAATGAAGCAAACAAGGTTCTCTCGGTGATTCACAAAAATACACTGGAACTCGAGGAGAACGTATTGATGGCAAAAATTACACCAGACAACAAGTACGTTGTGGTCGCTCTTCTCGATTCAACAGTCAAAATCTTCTTCATGGACTCCTTCAAGTTTTTTCTCTCGCTTTATGGTCACAAACTGCCTGTGCTCTGCTTCGACGTGTGCTACGACAATGCACTGATTGCGACAGGTTCAGCTGACAGAAACGTGAAAATTTGGGGCATGGATTTCGGCGACGTTCACAGCTCTTTGTTTGCACACGATGACTCAGTGATGGCGCTCCAGTTTATTCCGAAAACTCATATGTTTTTCACATGTGGAAAGGACGGCAAGATTAAGCAATGGGATGCAGATTCATTCAATAAAATTATCACATTGCCCGGTCATGTCGGAGAAGCGTATGGCTTGAGTGTAAGTCCAAACGGCCGCTATCTCGTTACATGCGGCGCCGATAGAACGTTGCGAATTTTTGAGAGGAGTGATGAAATGATTGTGCTGCAAGATGTCGAGGAAGAGGAAAGGGAGGAGGCTGAAAACAAAGAGTTAGCGACAGGCGAGGAGTCGTCAGCTCCCGGCTTGCCTGGTCTAAATCTGCCTTCGAAGAAAACTGTTGGCGCTGAAAAGGCTGCGGAAAATATCATCGAGTGTCTCGAGTTGAGCAAGAAGTTGGACGAAGACATGCCAAAAGAGCTGCCTGTCATTATGCAGTTCTACGAGGCGAAGACGACAAACGATTATTTGCTCGGTGTGTTTTCCAAAATACGCTCAAGCGATCTGGAGGAGGCATTGCTCCTTTTGCCGTTTTCCAACGTGTGCGAAATTCTCGAACGACTTCCGAAAATAGCCGAGCAGCGTGGCGACGAAATAGAACTTGTTAGCAAAGTTGTGCTGTTTCTCTTCCGAGTTCATCACAAATCAATAGTTTCAAATCAAATTCTCCTCTCCTCAATACAGAGACTAATAGCGAGCCTCGAGGCGTCAATTGTTGAAGTGAGAGACATGATTGGCGAAAATGTGCATGCAATGAGCCTTTTGCAGCGTCAAATCGAAGGCGAAAATAAGGTCGAGCTGTTCAAGGACGCCACGCGAGCTCGTAAGGTGAAATCGCAGAAGCAAAAGAAACGAAGAATCGCAAAAAGAGTTCACATGCAGATTACAGCT
Protein: 908 (aa)
MGVTKQYLRYKPAGTFNIIASSRVNGVFIDLNETSGRYIATGAAENILIWDLRTGEKVCELNRDKEEVTCLRSLGNKIAAGYVDGNVVVFNIDTKAAECMFTPHKSAVTCLQFDSEGINLVSGSLDTDCVVSDLVDQVGKYRLSGHSGPITACHFLETYKNTIITSSRDMQIKFWNIETQFCFKTLVDNTSEVWGLSLLRNETFLVTGSKETVLRVYKLLENKSHTENSTTSNAIFSDDDSISPLKCNFVGFIQRTGKGRTMNLMTDVEGQILACSGTNDEIELFYFNSREESMKRLSKRMKKLSVKKKEEGNEEADHSSDITLSDEIKRIGSIKTKDRVKSIDILLSATGELRVSVVFGSNLIRLYSINTAQKNPEPLLLRSIAQQGHHTECRSVCFSSDNLAIASGSGDSLKLWNRTSLACLRTIETDYILSTCFVPGDRHVLLGTKKGFLVIVDIVVGEIIESIQAHEKELWSVSLAPNLRSCVTGGGDNTVKFWSFELIPDPNNEANKVLSVIHKNTLELEENVLMAKITPDNKYVVVALLDSTVKIFFMDSFKFFLSLYGHKLPVLCFDVCYDNALIATGSADRNVKIWGMDFGDVHSSLFAHDDSVMALQFIPKTHMFFTCGKDGKIKQWDADSFNKIITLPGHVGEAYGLSVSPNGRYLVTCGADRTLRIFERSDEMIVLQDVEEEEREEAENKELATGEESSAPGLPGLNLPSKKTVGAEKAAENIIECLELSKKLDEDMPKELPVIMQFYEAKTTNDYLLGVFSKIRSSDLEEALLLLPFSNVCEILERLPKIAEQRGDEIELVSKVVLFLFRVHHKSIVSNQILLSSIQRLIASLEASIVEVRDMIGENVHAMSLLQRQIEGENKVELFKDATRARKVKSQKQKKRRIAKRVHMQITA
| Type | Start | End | Length |
| CDS |
4830 |
7395 |
2566 |
| CDS |
7481 |
7638 |
158 |
| intron |
7396 |
7480 |
85 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_001648996 |
hypothetical protein AaeL_AAEL004364 [Aedes aegypti] gb|EAT44252.1| conserved hypothetical protein [Aedes aegypti] |
0.0 |
| InterPro |
IPR019775 |
WD40 repeat, conserved site |
|
| InterPro |
IPR017986 |
WD40-repeat-containing domain |
|
| InterPro |
IPR015943 |
WD40/YVTN repeat-like-containing domain |
|
| InterPro |
IPR001680 |
WD40 repeat |
|
| InterPro |
IPR011047 |
Quinonprotein alcohol dehydrogenase-like |
|
| InterPro |
IPR007148 |
Small-subunit processome, Utp12 |
|
| Gene Ontology(MF) |
GO:0005515 |
protein binding |
|
| Pfam |
PF07992.9 |
Pyridine nucleotide-disulphide oxidoreductase |
0.0067 |
| Pfam |
PF00400.27 |
WD domain, G-beta repeat |
4.9e-58 |
| Pfam |
PF04003.7 |
Dip2/Utp12 Family |
2.9e-18 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| D. melanogaster |
FBgn0038597 |
| A. mellifera |
GB15856-PA |
| T. castaneum |
TC003001 |
| C. quinquefasciatus |
CPIJ008908 |
| P. vanderplanki |
Pv.02981 |
| D. plexippus |
DPOGS214773PA |
| S. invicta |
SI2.2.0_80425 |
| B. mori |
BGIBMGA005597-TA |
| A. gambiae |
AGAP001146 |
| H. melpomene |
HMEL010831-PA |
| A. aegypti |
AAEL004364 |
| N. vitripennis |
NV16802-PA |
| M. musculus |
ENSMUSG00000033285 |
| H. sapiens |
ENSP00000308179 |
| P. humanus |
PHUM018080-PA |