MidgeBase gene description page [Pn.14196]
Outline
| Gene ID | Pn.14196 |
| Type | Protein coding gene |
| Scaffold | PnScaf23034 |
| Start | 34636 |
| End | 35302 |
| Direction | - |
Sequence
Transcript: 522 (bp)
ATGGGGAATCATGGAGTTCCCATTTTAATTTTATTTTCATTGTTCATCGCCACATGCATTTGTACTGAATTTCTTCCGGCAATTATCGAAGGGCCGATAGTTGCGCCCATCGGATGCCACCGTCGACTTTATACTTTTCAAGTGACTCAAATCGATTCCAAGGGATACACATGTAGCGAAAAAATTACTGTTAATGCCTGCTACGGACGCTGTGACAGCAAGGAGATTAGCGACTGGAAGTTCCCTTTTAAGAAGAGCTTTCATCCGGTTTGCATGCCAAAGGGAATTTCAAAGGTTGTAATTATGCTCGAAAATTGTGATCCTGAGGCAGGCATTGAAGCGCGCCGCTACGAATATCTGGAACCTGTTTCTTGCCAGTGTCAAATTTGCTCCTCGGCACACACCTCCTGCGAGTCTCCACAGCTGCTCCACAAAAATCATCAGCACGTTGTGGGTGGCAAAGCATCGGCAATTTCGGCTGAGAACTACGGAGACGATCAATATATAACTTCGAGTGAAAAC
Protein: 174 (aa)
MGNHGVPILILFSLFIATCICTEFLPAIIEGPIVAPIGCHRRLYTFQVTQIDSKGYTCSEKITVNACYGRCDSKEISDWKFPFKKSFHPVCMPKGISKVVIMLENCDPEAGIEARRYEYLEPVSCQCQICSSAHTSCESPQLLHKNHQHVVGGKASAISAENYGDDQYITSSEN
| Type | Start | End | Length |
| CDS |
34639 |
35057 |
419 |
| CDS |
35118 |
35206 |
89 |
| CDS |
35289 |
35302 |
14 |
| intron |
35058 |
35117 |
60 |
| intron |
35207 |
35288 |
82 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_002002613 |
GI17479 [Drosophila mojavensis] gb|EDW12055.1| GI17479 [Drosophila mojavensis] |
4e-34 |
| InterPro |
IPR006208 |
Cystine knot |
|
| InterPro |
IPR001545 |
Gonadotropin, beta subunit |
|
| Gene Ontology(CC) |
GO:0005576 |
extracellular region |
|
| Gene Ontology(MF) |
GO:0005179 |
hormone activity |
|
| Pfam |
PF03045.10 |
DAN domain |
0.0007 |
| Pfam |
PF00007.17 |
Cystine-knot domain |
3e-06 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| D. plexippus |
DPOGS208491PA |
| A. aegypti |
AAEL001474 |
| T. castaneum |
TC012548 |
| C. quinquefasciatus |
CPIJ013235 |
| H. melpomene |
HMEL017883-PA |
| B. mori |
BGIBMGA010342-TA |
| D. melanogaster |
FBgn0063368 |
| P. humanus |
PHUM347250-PA |
| M. musculus |
ENSMUSG00000048982 |
| P. vanderplanki |
Pv.10211 |
| A. gambiae |
AGAP008302 |