MidgeBase gene description page [Pn.14191]
Outline
| Gene ID | Pn.14191 |
| Type | Protein coding gene |
| Scaffold | PnScaf23034 |
| Start | 8769 |
| End | 11640 |
| Direction | + |
Sequence
Transcript: 2724 (bp)
ATGTCAACAAAGGACCAGAAAATAAAGGAATTCCTTCAAACAAAAAGAGCGCCACTGGACGAATGGAACACACATGAGCAATTGTGCTTAGCATCGGCTGTGGCGTGCAGCGGAGATCAAAACTGGATGAGTGTGTCGCGGGCACTGAAAGGCATCGTTTTCTCATACAACTCGCGACCGACTGACTGGTTTTTGTCGAAAAGCTGTGCAACGCAGTACGGGAAATTGCTTGAGAGCGTAGAAACGCCGAAAAGGAAGAAGAGGACCGCTTCGGAGAAAGACGGATCAAATGCAGCGGAGCAGGTGCCCTCGACTCCCGTCGAGTCTTTGGTGAAGAAGCTCACAGGCGAGAGGATAATCGAGTTGAAAAAGGCAATTTCGGAGGAGCAGCAGCAGTATGCAAAACTCAAGGAAGAAATTCAATTCCTGCAGAGCTCGTCGATGGATGAGACGAGAATCCGAGAGATGTGGAATCAAATTGAGCAGGAGAACATTCAGAAAGAGCGCGAAAAAGTGAGACACGACCAGTGGCTGAAGGATCGCGAAGAGAAGAAGCGAGAGCACGAGCGCCAGTGGCGTGGTCCTTACAAAGCAAACATTCGACCGCAGAAATCTCAAGAAGAAATCGAGCCAGACACGACGACGGCAAGCACCTCTCAGCAACAAGCAGGTACTTCACCCTTGCTTACTTCGCTTCTAAAATCACCGTCTCAGGCTCCGGCCTCGACCGTGCAACAGTCGACTGTGTCAAGCAGCAGCTCTAACTCAGCTCGCATCGCTCCCACCATCACGAACCTCCTCACCACCACAACCACTGCCACCGCCGCTGCCGGCTTATCACAATCATCAGCTCCCAATACTCCTCTCATAACGCAAAACTCATCTGCACCAAACATTCTCATAAACGCTTCTTCCTCCGCATCATCATCATCATCCAACACCAATTTGGTGCAAAATGTCATTAATTCTGCTTCTTCTTCCTCTGTAGTTTCGTCTCACGCACATTCAGCACCGACACTTATCGACTTGCTCGATAAGAAGTCCACACTCACAGGTATTGTTTCGTCGACCTCGTCCACCTCGCAAAATGCGGCTTGCTCCTCTCCCTCCACTGCATATGATGTCAATAAACTGATGTCGTCAATTTCAGTTCCAGAATCGAGCGGCGGAAAGGAGGGCGACATTGTCAAGGACGAGGAGGCCGACATACTGGCCGATTTCAATGAGATCATTGACTGCGAAAAATTTGACATCGACGAAGATCTCGAGGACTTGAACTCCATCATCATGAACCCGGAAATTCTCGACGAGAAGATTTCCGATGGCGAGCCCATAAAGGACGCTGACGACTCATCGCAGGCGACCTCCACGGACGACTACGACAAGCTGAAGATCAAGCAGATTGTCGAGACGATTCAGGGCCTCGCCGGCGACTCGGAAGCCGTTGCCTCGACGAGTTCACTGTCGTCGGCAGTCGGAGCGGTGGCCTCGCTGCCGCTTGCCATTCCCGAGGAGAAGCCCGAGAAGGTCATCGCAATTGCTCCGTCGTTGGCTGAGGAGAGCGAAGCCATTCAGGCTCCGTCCGAAACGGAAAACTCCGAGCCGGCTTCTGTCGAGATGATTGAAGCGCCGGTGGAGTCAAACGACTCGACGACTCTCCAGCACACAAAAAACGAGTCGCCGCTTCCCGAGGACAAGGTCGTCATGATTTCCGACGAGAGCTCAAACACCAACGACAACGACAAGAAGGAGGAGTTGAGCGAGAAGGTGGACACGAACGATGAATCGCAGAGCGTCAAGTCGGGCGATGAGATCAAGGACGCGAGCGGCGAGGACTCGAACAAGGAAGCGCCGGCATTTCAAGGACTGCCCACAGCTGAGAGCGACGAGAACTCGGAGAGCAGCGAGAAGGAGAAGGAGTCGCGTGCGGCCAGTACATTTCGTCCGCTAGACGACTCGGACGATGCTATTTTCGAGGACGCCAGGGAGCATCATTCGGGGTCCGACAAGCTGCAGGTGTCCGACATCGGCAAGGAGGCGTCGCCCGAGAAGTCACTGTCCGAGGCGCCCGAAAGCAAGTTGTCGAAAACGGTCATTGCGACGGAGAGCGAGGAGGCCTCCCGCAGCGCCATTGATAGCGACGACGAGATGACGGAAATTAAAAGCTCGCGATCAATGGGCCGGAAGAAGATGGCAGACTCGCTGAAGGCGGACACGCCGAGCAGCTCCACGCGCTCTCGAGATCACTCGGAGAACGACGACAACCGCGACTCGACTCCGATAAGGACGAGAAGTCGACACAGCTCGACGGCCGTGAGCGAGACAAAATCGACGCAAATCTTTCCGAAGGAGCAGGATCACAACATGTGGAAGGCGCGATGGGAGGATTGCGCAAAGGAGCTGCAGAGGTTGAAGGACTTTTCGCAAGTCATCGACAGCCGGATTATGCAGGACGAGCACTACAAAAGGATTTGTCTGCAGCCAATGAACATGAAGATGATTGGCAAGAACATTGAGAGTCATGTGTCGACACTCAAAATTGACGTGGAGCGCGATTTCATCCTCATGTGCAGCAACATCATGATGGTGAGTGGCAACAAAGGACCCAAATTCGAGGAAACCGTGCTGCAGCTTATCAAGGATGGCAGGGAGATTATCGATTCGCACATGCGAGTCGAGGAGAGCTACAAGAGCTACCGCAAACAAATCAAGAAGCAAGCTCTC
Protein: 908 (aa)
MSTKDQKIKEFLQTKRAPLDEWNTHEQLCLASAVACSGDQNWMSVSRALKGIVFSYNSRPTDWFLSKSCATQYGKLLESVETPKRKKRTASEKDGSNAAEQVPSTPVESLVKKLTGERIIELKKAISEEQQQYAKLKEEIQFLQSSSMDETRIREMWNQIEQENIQKEREKVRHDQWLKDREEKKREHERQWRGPYKANIRPQKSQEEIEPDTTTASTSQQQAGTSPLLTSLLKSPSQAPASTVQQSTVSSSSSNSARIAPTITNLLTTTTTATAAAGLSQSSAPNTPLITQNSSAPNILINASSSASSSSSNTNLVQNVINSASSSSVVSSHAHSAPTLIDLLDKKSTLTGIVSSTSSTSQNAACSSPSTAYDVNKLMSSISVPESSGGKEGDIVKDEEADILADFNEIIDCEKFDIDEDLEDLNSIIMNPEILDEKISDGEPIKDADDSSQATSTDDYDKLKIKQIVETIQGLAGDSEAVASTSSLSSAVGAVASLPLAIPEEKPEKVIAIAPSLAEESEAIQAPSETENSEPASVEMIEAPVESNDSTTLQHTKNESPLPEDKVVMISDESSNTNDNDKKEELSEKVDTNDESQSVKSGDEIKDASGEDSNKEAPAFQGLPTAESDENSESSEKEKESRAASTFRPLDDSDDAIFEDAREHHSGSDKLQVSDIGKEASPEKSLSEAPESKLSKTVIATESEEASRSAIDSDDEMTEIKSSRSMGRKKMADSLKADTPSSSTRSRDHSENDDNRDSTPIRTRSRHSSTAVSETKSTQIFPKEQDHNMWKARWEDCAKELQRLKDFSQVIDSRIMQDEHYKRICLQPMNMKMIGKNIESHVSTLKIDVERDFILMCSNIMMVSGNKGPKFEETVLQLIKDGREIIDSHMRVEESYKSYRKQIKKQAL
| Type | Start | End | Length |
| CDS |
8769 |
8818 |
50 |
| CDS |
8879 |
9089 |
211 |
| CDS |
9175 |
11637 |
2463 |
| intron |
8819 |
8878 |
60 |
| intron |
9090 |
9174 |
85 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_310403 |
AGAP003845-PA [Anopheles gambiae str. PEST] gb|EAA05996.5| AGAP003845-PA [Anopheles gambiae str. PEST] |
5e-71 |
| InterPro |
IPR001487 |
Bromodomain |
|
| Gene Ontology(MF) |
GO:0005515 |
protein binding |
|
| Pfam |
PF00439.20 |
Bromodomain |
1.2e-06 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| P. vanderplanki |
Pv.03026 |