MidgeBase gene description page [Pn.14180]
Outline
| Gene ID | Pn.14180 |
| Type | Protein coding gene |
| Scaffold | PnScaf22958 |
| Start | 38850 |
| End | 39336 |
| Direction | - |
Sequence
Transcript: 423 (bp)
ATGAAGCTCCTTCTGCTGATGACATTGTTCGCATCTGCTTGCATGCTCGCCAATGCAAAAATATATTCGAAATGTGAACTAGCGAAGAAGTTAGATGGCGTCTTTCCAAGAAATAAACTGCCTGATTGGATGTGTCTCGTTAAGCACGAGAGTTCTTACAATTCGAACTCGAAAGGCGCGAGGAACAAAAATGGCTCATACGATTGGGGGATTTTTCAAATTAATGATAAGTACTGGTGCGGCGACGGAAAAGTAGCAGGAGACTGTCGAATAAAGTGTCAGGATTTTATAAATGACGATATAACCGATGATATCACATGTGCGAAGAAAATTTTCAACCGACATGGGTTCGACGCTTGGTATGGATGGAAAAATAACTGTAAGGGAAAATCGCTGGCTGCTTACTCTGTGAACGACTGTTTC
Protein: 141 (aa)
MKLLLLMTLFASACMLANAKIYSKCELAKKLDGVFPRNKLPDWMCLVKHESSYNSNSKGARNKNGSYDWGIFQINDKYWCGDGKVAGDCRIKCQDFINDDITDDITCAKKIFNRHGFDAWYGWKNNCKGKSLAAYSVNDCF
| Type | Start | End | Length |
| CDS |
38853 |
38992 |
140 |
| CDS |
39054 |
39336 |
283 |
| intron |
38993 |
39053 |
61 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
AAO74844 |
salivary lysozyme [Anopheles stephensi] dbj|BAC82382.1| lysozyme [Anopheles stephensi] |
4e-37 |
| InterPro |
IPR001916 |
Glycoside hydrolase, family 22 |
|
| InterPro |
IPR019799 |
Glycoside hydrolase, family 22, conserved site |
|
| InterPro |
IPR000974 |
Glycoside hydrolase, family 22, lysozyme |
|
| InterPro |
IPR023346 |
Lysozyme-like domain |
|
| Gene Ontology(BP) |
GO:0016998 |
cell wall macromolecule catabolic process |
|
| Gene Ontology(MF) |
GO:0003796 |
lysozyme activity |
|
| Pfam |
PF01464.15 |
Transglycosylase SLT domain |
9e-05 |
| Pfam |
PF06737.9 |
Transglycosylase-like domain |
0.059 |
| Pfam |
PF00062.15 |
C-type lysozyme/alpha-lactalbumin family |
4.3e-36 |
| Pfam |
PF05497.7 |
Destabilase |
0.0039 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| P. vanderplanki |
Pv.08811 |