MidgeBase gene description page [Pn.14162]
Outline
| Gene ID | Pn.14162 |
| Type | Protein coding gene |
| Scaffold | PnScaf22888 |
| Start | 4961 |
| End | 8139 |
| Direction | - |
Sequence
Transcript: 1554 (bp)
ATGGTTCGAGGTCGCAAACCGCGTGTTCAAAAGACGACTTCGCATGGCACATCGTCGTCGTCGCCAACGAAAAAGCTTCCGACAAATAGTCTACTGGTGAATGCCCTTTTCGAGGCGCACGACAGCGCTTTCAGCAGCCCGAAGCGGAAAGAGTCGAAAATCGATGGCGTGCTGATGGAGAATGGCGTGGGAAAGCAGACGGCAAACGGAAAGACAAAGCCCTATCGGCCAGCGACTCGGTCGACGCGGAAAATCAACGAATATTTCGCCAAACTCCCCGCAAACGGAATCATTCGCGTCCAGAACGGGCACGGCTCGCACTCGGAGGACAGCTGCGACTCGATCGAGGACGATCGCGACGACACGAACAAAACAGCCGAAAATGTGCCCCCAGGCAACCAAACGGTCACCTCGAACATGCCGATTCTGAAGCCTGAGGCGCAAATGGCCAACACCAATCTCTTCCTGCAGGAGCCCGTGCTGAAACTCGAATTCGACAAGAACGAGGCGGTTGTCATGAGCATGAGCGGCATCGGCCCCTCGACCATCAAGTCATCCTTTCTGACCACAGAAATCACGACGAAATTTCAAACGCTGCCACCGACCGAATACATCAACAAAGTACTCAACGTAAATGGATCTCACGACGGCGACGCGCCGTCCAATGAGCAAAATGGATTTCTACTTAACTCCGACAGCAACTCCAGTGACTCGGGCGTGGTGTTTGCGAACGGCGACTCCGACGGCGCCGTCGATTCCAACTTGCTGAAGTCGCCGATGCAAAATGGCGCCCGCCAAAAGCCAACCACACCGCACCGAATGATTCTGTGTCCGTCGCCAGTGAAAATTGCTCCGAGTGTTCACAACAAGCAAACCGCTGAAATTATCAAGGCGTCGAGGAGTAAGGGCCGCGCGAAGGCAAAACTTGCACTGACGAGCGAAGAAGTCGTCCAGCAAGACCACGACTACTATGATATAAAGAAACCCCAAGAAGTCAAAACGCTTAACAAGCCTTCGACGGTTGAAAGCAACAAGAAAGTCACAGAGTTCTTTACCGTCCGTCGAAGCGTTAGAAAAACGAAGAAGGAAGTGCAGGCGGAGCGTCTGAAAGACTTGGAACAGGCTATTCTCGAGGAGCGAGAGGAGGGATTAGAGGTTAAAGTTTTTCCAAATAAAGGCCGAGGAGTCATCTCGACACGTCCGTTCAAGCGCGGGGAGTTTGTCATTGAGTACATCGGCGATCTCATATCAATAGCTGAGGCAAATGACCGCGAAGTGAGCTACGCTGCGGACGACAATACGGGTTGTTATATGTACTATTTTAAACACAATGAGCAACAATACTGCATTGATGCAACAGCAGAGACTGGAAAATTAGGACGTTTAGTGAATCATTCCCGCAATGGCAATCTAATGACGAAGGTAGTGATGATCGGAAAGCGGCCACATCTGGTGCTGATCGCGAAGGAGGATCTTCCGGCTGGCGTAGAGGTCACCTATGACTACGGCGATCGGTCGAAAGAGGCACTCCAACACCATCCATGGTTGGCTTTC
Protein: 518 (aa)
MVRGRKPRVQKTTSHGTSSSSPTKKLPTNSLLVNALFEAHDSAFSSPKRKESKIDGVLMENGVGKQTANGKTKPYRPATRSTRKINEYFAKLPANGIIRVQNGHGSHSEDSCDSIEDDRDDTNKTAENVPPGNQTVTSNMPILKPEAQMANTNLFLQEPVLKLEFDKNEAVVMSMSGIGPSTIKSSFLTTEITTKFQTLPPTEYINKVLNVNGSHDGDAPSNEQNGFLLNSDSNSSDSGVVFANGDSDGAVDSNLLKSPMQNGARQKPTTPHRMILCPSPVKIAPSVHNKQTAEIIKASRSKGRAKAKLALTSEEVVQQDHDYYDIKKPQEVKTLNKPSTVESNKKVTEFFTVRRSVRKTKKEVQAERLKDLEQAILEEREEGLEVKVFPNKGRGVISTRPFKRGEFVIEYIGDLISIAEANDREVSYAADDNTGCYMYYFKHNEQQYCIDATAETGKLGRLVNHSRNGNLMTKVVMIGKRPHLVLIAKEDLPAGVEVTYDYGDRSKEALQHHPWLAF
| Type | Start | End | Length |
| CDS |
4964 |
5171 |
208 |
| CDS |
5250 |
5440 |
191 |
| CDS |
5507 |
5738 |
232 |
| CDS |
5852 |
6764 |
913 |
| CDS |
8130 |
8139 |
10 |
| intron |
5172 |
5249 |
78 |
| intron |
5441 |
5506 |
66 |
| intron |
5739 |
5851 |
113 |
| intron |
6765 |
8129 |
1365 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_001658906 |
histone-lysine n-methyltransferase [Aedes aegypti] gb|EAT48798.1| histone-lysine n-methyltransferase [Aedes aegypti] |
4e-94 |
| InterPro |
IPR001214 |
SET domain |
|
| InterPro |
IPR016858 |
Histone H4-K20 methyltransferase |
|
| Gene Ontology(MF) |
GO:0005515 |
protein binding |
|
| Gene Ontology(MF) |
GO:0018024 |
histone-lysine N-methyltransferase activity |
|
| Pfam |
PF00856.23 |
SET domain |
7.9e-19 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| M. musculus |
ENSMUSG00000049327 |
| A. aegypti |
AAEL000193 |
| D. plexippus |
DPOGS206896PA |
| A. gambiae |
AGAP012481 |
| S. invicta |
SI2.2.0_02694 |
| C. quinquefasciatus |
CPIJ000732 |
| B. mori |
BGIBMGA012853-TA |
| P. humanus |
PHUM315980-PA |
| H. sapiens |
ENSP00000413811 |
| H. melpomene |
HMEL006860-PA |
| P. vanderplanki |
Pv.06264 |
| D. melanogaster |
FBgn0011474 |
| H. sapiens |
ENSP00000384629 |
| T. castaneum |
TC015766 |
| H. sapiens |
ENSP00000332995 |
| N. vitripennis |
NV11709-PA |
| A. mellifera |
GB15777-PA |