MidgeBase gene description page [Pn.14059]
Outline
| Gene ID | Pn.14059 |
| Type | Protein coding gene |
| Scaffold | PnScaf22236 |
| Start | 4492 |
| End | 8650 |
| Direction | - |
Sequence
Transcript: 2595 (bp)
ATGACGACAATGTCGAAAGATGCGCCGCTTGATTCTGAAGACTCGATTCGACTCGTGAGCCCCGACTTTCAAGGATCGGCGACGACGCGAGCGAAACAAAAAATTACAAATGACAGCGAGTCAAACAGCATCAACAATTCTATCAAATCGACAGACTCCAATCAATCAATCAGCTCCGACACCATCGACTTTCACAGCGAGGATATCGTGATGAAGAATGCCGAGAATTCAAAATGGGTGCAACACAAGTCGAGGATTGCGTCGGGCAACGCTAGCCAGAAGCATGGGGGGAAGAATTGCACCAAGCAGCACTCGTCAAACAATCAATCGGAGCTGAGCGATTGCGGCTACGGAACGCAGGTTTCACAAGGTGAACAGAATCAGGAGTCGATTTCGACGTCGAGCAACGACGACGACAGCAGCCCGAAACAAAAGCCCGCCCACCAAAAGCCGCCGAGCACGAATCAGAAGCAGCGCTTCAACGCGGCCCAAAAGCAGCGAAATGTCGCGGGCGGGATGACGCAAGAGAAAAAGGACGCCCGCCGCAAGAAGCTCGTGAAGCGCAGCAAAAGCTCGATCATCAACATGAAGGGCCTAATTCATCATACGCCGAGCGACGAGGACATTTCGAACATTCTCAAGGAGTTCACGGTTGACTTCCTGCTGAAGGGCTACGGCTCCTTGGTGCAGGACTTGCACGCACAATTATTGAGCGACATCCAGTTGTCGATCGACACGTCGCACTTTTTCTGGCTGGTCACTTACTTCCTCAAGTTTGCTGTGCAACTCGAGTTGGACCTGGAGCACATCAGCACAGTCCTGTGCTTCGATATCGTCTCATACCTCACGTACGAGGGCGTCAACTTGTGCGAACAACTGGAATTGATTTCGCGACAGCAGGGCACCGATCTGAAGCCCCATCTGCGACGCATTCACCTCGTGGTCGCCGCAATCCGCGAGTTCTTGCAGGCTCTGGAAGTCTACAAGAACAGCAGCCACCTGTCCATGGAGGACACGCAGTTCATTGTCAACTTGCAGACGCAAATCTGCTGCACCGAGGACTTGCGCGATCTCTTCGTGCTCCTCCTCCGACTGTACAACCCGAATCTGCAATCGCGACAGTACTTGCAGGACCTCATCGTCACCAATCACCTGTTGCTTCTGCTGCTGGACAATGCCTCGAAGAAGGCCGACCGAAAGTGCAAAATAAAGATGGTCGAGCACATTACGCAGTTTGCGACTGTCGACATCATGCATCAGTATGGAATTTTGCTGGAGAATTTCCACGAGAATGGAGATTTCGTTAATGATTGCTGTTTCACTCTGATGCATCACATCGCCGGCGAGCTCAATCAAGTGACGATTCTCTTCCAGCCAAACATTCTGAAGACATACAGCCAAATCTGGGAGACGGAATATGAGATTTGTGACGACTGGTCAGACTTGATCGAGTATGTCATACACAAATTCATCAACACTCCGCCGAAACCGCAAATTGCGCTGCCGAGTCCGGCGCGCTCCGACGGAGTTTCAATAAACGACCTGTGGGCCCAGGAAGAGATGGACACGCTCTACTGGTATTATGTGCAGAGCAAAAAGCACAAGGACATCGTCGGACATATCATCAAACAAATCAAGGATTCGGGCCAAAAGTCCAAGTCCCGCATGGCTGTCATCCAGCAGCTCCTGCAGCAGGACATCATCTCGCTAATCGAGTACGATGATCTGATGAAATTCGAGGACTCTCAGTACGAGAGGGAGGCGAAAACCTCAGGCATATCAAACACATTGGAGGAGTCGGGATTTTCCGAGAACTCTGACATTAGCGTAAACAATCAGCCAGATGATATTAAGGTGTTGCGTGATCGCTTGTTGAAGGAGAACAAGGGAATGCTTGTGACATGGCTGCAGCGTGTCTTGATCGAATGCTGCTTCATTAAATTGAAAATGTACTCAATCAATGAGGACTTCGTGGAGCTCTCTAATCAAACCATTATGGAACCCGTGCCACACCACTGCATCTTGAAAAAGCAGTCGATACCTCTGGTCCCGTACAATTCTGAGCAGCATAAAATCTTGGTCTATCAGCCGTTCGTTCTCTTATTGCATAAGCTCGGTTTTCATCTGCCAGCTGATGCGAATAAGCTGTTTGTTAGAATCCCAGAGTTTTGGACATGGGACATTCTGTTGGGTGTCGCAGAGAAGCTCGGACCGATACCAAAGAAGAATTTGAAATTTGACATCGATCGCATTCGAAAGACGACAAAAAATGTTGCGATCGCAGCGGAAGAGCCGGTAATAGCAATCAAACCAGACACCACGAGTCAAAACAGCCAGAGTTCTGACTCTGGTGTGGCATGTAGCAATCAACAGAGTTGGCTTCAGATGGTCGTCCAGAACAAGTCTTCGGCAGAGAGGATGGTTCTTTCGCAACATCCGCAACTTTTGGTAAAGTCAAGTCCCTCGGAGACCGTCACAAAGCATAGCTTCCTGCAGCCCACGCCACCCAAGAAAAATTCAATAACAAAGTCCGAGTGTGACATGCAAACTTTTAGCGAAAACGATAGTCCTATTCATACGGACGAAGTGATAGAG
Protein: 865 (aa)
MTTMSKDAPLDSEDSIRLVSPDFQGSATTRAKQKITNDSESNSINNSIKSTDSNQSISSDTIDFHSEDIVMKNAENSKWVQHKSRIASGNASQKHGGKNCTKQHSSNNQSELSDCGYGTQVSQGEQNQESISTSSNDDDSSPKQKPAHQKPPSTNQKQRFNAAQKQRNVAGGMTQEKKDARRKKLVKRSKSSIINMKGLIHHTPSDEDISNILKEFTVDFLLKGYGSLVQDLHAQLLSDIQLSIDTSHFFWLVTYFLKFAVQLELDLEHISTVLCFDIVSYLTYEGVNLCEQLELISRQQGTDLKPHLRRIHLVVAAIREFLQALEVYKNSSHLSMEDTQFIVNLQTQICCTEDLRDLFVLLLRLYNPNLQSRQYLQDLIVTNHLLLLLLDNASKKADRKCKIKMVEHITQFATVDIMHQYGILLENFHENGDFVNDCCFTLMHHIAGELNQVTILFQPNILKTYSQIWETEYEICDDWSDLIEYVIHKFINTPPKPQIALPSPARSDGVSINDLWAQEEMDTLYWYYVQSKKHKDIVGHIIKQIKDSGQKSKSRMAVIQQLLQQDIISLIEYDDLMKFEDSQYEREAKTSGISNTLEESGFSENSDISVNNQPDDIKVLRDRLLKENKGMLVTWLQRVLIECCFIKLKMYSINEDFVELSNQTIMEPVPHHCILKKQSIPLVPYNSEQHKILVYQPFVLLLHKLGFHLPADANKLFVRIPEFWTWDILLGVAEKLGPIPKKNLKFDIDRIRKTTKNVAIAAEEPVIAIKPDTTSQNSQSSDSGVACSNQQSWLQMVVQNKSSAERMVLSQHPQLLVKSSPSETVTKHSFLQPTPPKKNSITKSECDMQTFSENDSPIHTDEVIE
| Type | Start | End | Length |
| CDS |
4495 |
4672 |
178 |
| CDS |
4728 |
4953 |
226 |
| CDS |
5037 |
5111 |
75 |
| CDS |
5187 |
5279 |
93 |
| CDS |
5340 |
5508 |
169 |
| CDS |
5616 |
5931 |
316 |
| CDS |
6016 |
6122 |
107 |
| CDS |
6449 |
6567 |
119 |
| CDS |
6643 |
7584 |
942 |
| CDS |
7903 |
8056 |
154 |
| CDS |
8435 |
8650 |
216 |
| intron |
4673 |
4727 |
55 |
| intron |
4954 |
5036 |
83 |
| intron |
5112 |
5186 |
75 |
| intron |
5280 |
5339 |
60 |
| intron |
5509 |
5615 |
107 |
| intron |
5932 |
6015 |
84 |
| intron |
6123 |
6448 |
326 |
| intron |
6568 |
6642 |
75 |
| intron |
7585 |
7902 |
318 |
| intron |
8057 |
8434 |
378 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
AAY40757 |
TIMELESS [Aedes aegypti] |
0.0 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| A. aegypti |
AAEL006411 |
| H. melpomene |
HMEL007329-PA |
| D. plexippus |
DPOGS214179PA |
| A. gambiae |
AGAP008288 |
| B. mori |
BGIBMGA006226-TA |
| T. castaneum |
TC013997 |
| P. vanderplanki |
Pv.17687 |
| C. quinquefasciatus |
CPIJ801582 |
| P. humanus |
PHUM583070-PA |
| D. melanogaster |
FBgn0014396 |