MidgeBase gene description page [Pn.14019]
Outline
| Gene ID | Pn.14019 |
| Type | Protein coding gene |
| Scaffold | PnScaf22047 |
| Start | 19878 |
| End | 26629 |
| Direction | - |
Sequence
Transcript: 2382 (bp)
ATGGGCCATTACGACAATGTGCAGAAGAAGGGAATCTTCTGCAACATCTTTCGAAATATTGATGTCGTTCAGCCGACTAACATTCCGACTGCTCAAGTAACTGCTCAGGCGATGCATGATAGTACTACTACCGCTACTACCACCGCGAAATCCTCAGCATCTCACTCACCGTACGCCGCAAGCAGTGTCGACGCGATGCTCCTCGAGAAAACCAAGCGCGAGCGCGTGCTCTCGAGCAGCAGCGACGACAACTTCGACTTCGAGCCGTACTCGCGTCGCGACTTCAAGATGGACCTCAAGGGGGGCGTCACGGCCGCCGACAAAGACACGCCGACTTCCGGCTACCAGACGACGTCGCCGAACGAGCAAATCGGCGGCGGCGTCGGAGGCGGCGTGATGAGCCCCGAAAGCAGCGACTACGAAAAATACGACGTGAACGTCCACGGCAAGAACTCCGTCTACCGCAAGTCGGTGAGCTTCGATCTCGACGTCGAGGACGCCGAGCGGACGGACTCGGAGGAGAGGAGGCAGCAGCAGCAGTCGCAGCAGCCGAAGGTCATCAAGGGCATCCTGAGGGCGGCGAGTCCGAGCGTCTACGCCATTCCAACAACAACGATCATCACCACCGAGGACGAGGACGACAGCGATGAAGATGATGATGAAGAAGAAGAAGACAGCGAGAATCCTTTCACGAAGGAGTTCGAGGACGCGGCACTGGCGGCCATTTCGGCCATTTCCGACTCGGACCACTCGGACACGAATGTTACCTCTCGTCTTCGACCGGCACCGCCGCCGCCGACGTCGGCGTCGAGGATTCCGGTCAAGAAGACAATCTTCAAGTCGACGGCGACGGTGGTGAATCCGAGCGAGGAGTTACGTCCGAAAATCCCGCCGCCACGACCGCCGAAGCCGCTGGTGAAGCGAGCGGAGGTGAAGACGAATGAGGGCTTGGTGAAGCTGAGCCAGCAGATGGAGGACGAGGACTTCCTCGAGTTTGTGCACGATGTGCGGACCAACACGATCCAGGAGGTGGGCGACTTCAATCCGGACAATTGTCCACTGCCGCCACTGCCGAAGGCGCCGCCGCCAGTGAGAAGAGCGGCGAGCGTGGAGCGACCGAAGGATAGTCCGCCTCCGCCGCCGCCACCCGCGTTACTGCTCAAGAGTCCGTCGCCGGAGATAATCGAGATTTTGCCTGCGAAATTCGACAGCTTTCCGCGCAAGCAGACGGCCAACTTCGTGAACGAAAACTCGCCGGTGAATGTGCTGGTGACGGAGGAGGAGCACCGCGAGATTCTGCTGAGCGAGAACGAGGCTCGCAACACACTGCTGTATGTTGACGTAGATAGATGTGCGCCCGGCAATGCCGGTAACGAATTATTGACCTCAAATTTCTCTTCTTCCTCCAACAATCCCTTCCTGGAAAATGCGTCGTCGTCGGCGTCGTTTAGCTATCGCGGCTATGCGTCGCCCAATCCGCTCTCGCCACAGTCGACGATCGATCGATCGAGCGAGAGCACGTACACGTCGGTGTACAGCCCTCCGCAAGTCCTGCCCGTGCACTATGGGCAGCTGCCGAAGCCCCAGCACACGGGCTACTCGCTCGTGCCGCAACCGCAGCAACAGCAAGCGTTTGTCTTTTCACAGCCGCCGCAACAGTCGCAGCAACAGTTCTTGGTGAGTGGTGACGGTCAAAATCCATTCTATGTCACAAATAACAATAGCTATAGTGCGCACACCATTGCAAATAATCATCATCCGATGCAATCATTATTAATGCAATCGGCTTACATGCCGCCACTGCCATCGTCATTTAATAGTAGTTTTCACGCGTCGACACCACAGCAACAACACCAGCAACAGCAACAGCGACACATGGTGCAACAGTCGCACCAACAGTTTGTCTTTTCGCATGAACAGCCGCAGCAACAACAACAAAGCGGCTTCTACACCGCACAGAACTTTCAAAGCAATGTCGCGAGCGAAAGTTCTGTCGAACACGACCATAGCTTGCGTCGGCAGCAACAGGTCTTGCTGTCGCCCATAAGGGTCAATCAAGTGCAACAGCACTTTGTGTTTCCTCCCGAAGGCGAGGCTCCGCAGTCGCCTCCGTTCGCCTCTTTCGGCAAACAGACTCAATCGCCGACGCCGCCACCGTCTGCGAAGGCAGAAACGCCGAAGACAGTCTCGGATAAGAAGCGTTTCTTTGAGCATGTAATGGAAGATCAACAGAAACCGACACCTAAATCAGCCGCAAGATTCTCGGTCGAATTCCTCGCCCCTCCGCACAGCTCTCACCTCGAGCACTATTTAAAATTCATCCCAGAGGATGCTCGAGCTTGTTTGCTGAGGATGCGGCAGCAGCAGCAGCAGCAGCAGAGA
Protein: 794 (aa)
MGHYDNVQKKGIFCNIFRNIDVVQPTNIPTAQVTAQAMHDSTTTATTTAKSSASHSPYAASSVDAMLLEKTKRERVLSSSSDDNFDFEPYSRRDFKMDLKGGVTAADKDTPTSGYQTTSPNEQIGGGVGGGVMSPESSDYEKYDVNVHGKNSVYRKSVSFDLDVEDAERTDSEERRQQQQSQQPKVIKGILRAASPSVYAIPTTTIITTEDEDDSDEDDDEEEEDSENPFTKEFEDAALAAISAISDSDHSDTNVTSRLRPAPPPPTSASRIPVKKTIFKSTATVVNPSEELRPKIPPPRPPKPLVKRAEVKTNEGLVKLSQQMEDEDFLEFVHDVRTNTIQEVGDFNPDNCPLPPLPKAPPPVRRAASVERPKDSPPPPPPPALLLKSPSPEIIEILPAKFDSFPRKQTANFVNENSPVNVLVTEEEHREILLSENEARNTLLYVDVDRCAPGNAGNELLTSNFSSSSNNPFLENASSSASFSYRGYASPNPLSPQSTIDRSSESTYTSVYSPPQVLPVHYGQLPKPQHTGYSLVPQPQQQQAFVFSQPPQQSQQQFLVSGDGQNPFYVTNNNSYSAHTIANNHHPMQSLLMQSAYMPPLPSSFNSSFHASTPQQQHQQQQQRHMVQQSHQQFVFSHEQPQQQQQSGFYTAQNFQSNVASESSVEHDHSLRRQQQVLLSPIRVNQVQQHFVFPPEGEAPQSPPFASFGKQTQSPTPPPSAKAETPKTVSDKKRFFEHVMEDQQKPTPKSAARFSVEFLAPPHSSHLEHYLKFIPEDARACLLRMRQQQQQQQR
| Type | Start | End | Length |
| CDS |
19881 |
19907 |
27 |
| CDS |
22337 |
22440 |
104 |
| CDS |
22553 |
22664 |
112 |
| CDS |
24115 |
26196 |
2082 |
| CDS |
26451 |
26475 |
25 |
| CDS |
26598 |
26629 |
32 |
| intron |
19908 |
22336 |
2429 |
| intron |
22441 |
22552 |
112 |
| intron |
22665 |
24114 |
1450 |
| intron |
26197 |
26450 |
254 |
| intron |
26476 |
26597 |
122 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_001848126 |
conserved hypothetical protein [Culex quinquefasciatus] gb|EDS27692.1| conserved hypothetical protein [Culex quinquefasciatus] |
5e-21 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes