MidgeBase gene description page [Pn.13969]
Outline
| Gene ID | Pn.13969 |
| Type | Protein coding gene |
| Scaffold | PnScaf21818 |
| Start | 1306 |
| End | 2043 |
| Direction | + |
Sequence
Transcript: 507 (bp)
ATGGACCCCGAAATGAATGCGACGACAATCGACCACGACCTTCATCGGTATCCGTTCTGCCTGGTGTGGACGCCCATTCCGCTGCTCACGTGGCTCCTTCCCTTCGTCGGTCACATGGGCATCGCGACGTCGCGCGGAGTTATCCGAGATTTTGCTGGTCCCTACTTTGTGAGCGACGACCAGATGGGTTTCGGCTGGCCGACGCGCTACCTTCAGCTGGACGTCGGTAAAGTTGAGGGTGGCGCGAGCTCGTGGGATGACGCGGTGCAAAAAGCGTCGGCCGAGTACGCGAAGCGGATGCACAATCTGTTCTGGGACAACTGCCACTCGCACTGCGGAATGGCGCTGGCGACGATGCGCTACGGCGGCAGCTCCTGGTGGAGCATGGTGCGACTCGCGGCGTGGATGTTCTTCTTCGGAAAGTACGTGGGCTTTTGGGGCTTCGTCAAGACCTGGCTGCCGTTTCTCGTGATTGTCGCCTTTGGTGTCTGCGTGTGGCAGCTCGCT
Protein: 169 (aa)
MDPEMNATTIDHDLHRYPFCLVWTPIPLLTWLLPFVGHMGIATSRGVIRDFAGPYFVSDDQMGFGWPTRYLQLDVGKVEGGASSWDDAVQKASAEYAKRMHNLFWDNCHSHCGMALATMRYGGSSWWSMVRLAAWMFFFGKYVGFWGFVKTWLPFLVIVAFGVCVWQLA
| Type | Start | End | Length |
| CDS |
1306 |
1462 |
157 |
| CDS |
1691 |
2040 |
350 |
| intron |
1463 |
1690 |
228 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_320483 |
AGAP012042-PA [Anopheles gambiae str. PEST] gb|EAA00221.3| AGAP012042-PA [Anopheles gambiae str. PEST] |
2e-54 |
| InterPro |
IPR008496 |
Protein of unknown function DUF778 |
|
| Pfam |
PF05608.7 |
Protein of unknown function (DUF778) |
4.5e-36 |
| Pfam |
PF14207.1 |
DpnD/PcfM-like protein |
0.15 |
| Pfam |
PF07311.7 |
Dodecin |
0.086 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| H. sapiens |
ENSP00000417603 |
| B. mori |
BGIBMGA009916-TA |
| P. vanderplanki |
Pv.03799 |
| C. quinquefasciatus |
CPIJ012505 |
| M. musculus |
ENSMUSG00000028857 |
| H. sapiens |
ENSP00000417853 |
| P. humanus |
PHUM523550-PA |
| H. melpomene |
HMEL014800-PA |
| H. sapiens |
ENSP00000363189 |
| S. invicta |
SI2.2.0_04065 |
| T. castaneum |
TC009021 |
| D. melanogaster |
FBgn0032000 |
| A. gambiae |
AGAP012042 |
| N. vitripennis |
NV12271-PA |
| A. mellifera |
GB10046-PA |
| D. plexippus |
DPOGS205703PA |