MidgeBase gene description page [Pn.13948]
Outline
| Gene ID | Pn.13948 |
| Type | Protein coding gene |
| Scaffold | PnScaf21771 |
| Start | 9090 |
| End | 12541 |
| Direction | + |
Sequence
Transcript: 2700 (bp)
ATGGCTCCCCCGCCGCTCGTTACAGGCATTTCGCCTAAGGAAGGACCACCTGGAACAAAAATCACAATTCGAGGAGAAAATTTGGGGTCGCGAGCAAACGACCTGATTGCCGTCGAAATCTGTGGCGGAGAGTGCTCATTCGAATGGGTCTCAAAGAACAAAATAATCGCTAGAACGGGCATCAGCGGACAAAAGGGAAAGGGCGACGTGGTCGTGACAACGCTGAGTGGCGGAACTGGATCTTCGACAGTTCAGTTCAGGACTTACATTGAGACGATTGGGCCGCTTAAAGAGTCGGCCGTGTGGGTCGACGAATCGCCTGTGCAATCTCTCGCGTGGGGTCGCCGGACGATGGCCACTTCGGGCTATCACACGGCCGACGATCCGCTTGGACTTTCAATCGAAGGCAATGACAAAAAATTTCCGGACGACTTGCGGGAAATTTTCCCCGAAAATTCCGGCGATTTGTCGCGAGAAAACTTTTCGCCGTGCTGGTTTCTGCTCGAGAATCATCACGCCACGTCGTTCGACGACTTGCGAGCCGGCTACTCTTATCTGAAGCGGAAGGTCGAGGGACAGAAGGAAGGCCAACTGAGTTTTCTGAAAACTCACGTCGGAGCCGTCATCGACCAGCTCGACACGATGATGAATCTGAAGCAGAAGATGGATAACGACGGCGACGTCGATATTGCGCAAAGAGTCCACAATCTTCAGGACACCATCACCAAGTCGATCGACTCATCTCACGCTCTCTTCGACGACGTCCTCAAGCGCCGCGAGAAGGCGGACAAGTCGCGAGCAGCACTCTCCGTCCTAAATCGCTACAAATTTCTCTTCTGTCTCCCGACAAACATCGAAAAAAACGCCTCCAAAAACGAGTTCGACATCATCGTCAATGACTACGCGAGAGCGAAAAATCTGTATGGAAAGTCCGACATTCCGCTCATCCAGCGAGTCCTCGCCGAGGTGGACGAGATAATTCTGGAGGTACGAAAGGAGCTGCACAAGAAGATCCAGGAGATGCCGCAGGGTGTCGAGCAACAAAAGCGATTCGTAAAGTCGCTAATAAATTTAGAGATCCAGCAAATCGGAACAAAGCAGGCCGAGAAACTCAAAATCACGGACCCGGCGTGGGATGCTATTGCGAGCCGGGCGCGATATATCGAGGAAACGTTTAAGAGGACGTACGAGGAGTTCCAGGAGCGCGAGAGCCAGCAAAAAGAGTCGACCAAACGCGACCAGGGCTCGCCCCCGATTCGGGTTCTTTTCTGCGAGGAAATCACCGAGATCGCGACCGGCCAGTTTCCCGACCTGTGGCGCCTCGGCCAGTCGTATTTCACGGGCGAGCTGCGCGGCATCAACGAGCCAAAGCCAGGCAACTTCAAACAGATCATTCTGAATGCGATCGAGCGATTTTGCTGCTACGTCCGCGCCGCGATTCTGCCCCAAAACAAAAAGTTCGCTTCAGTGCCCTCGTGGCTGTTCGCATCGCCCTCGCAACTGAGTTTGTTCAGCACGTGGCTGCCGACGTGCTTGCGCTACCTGCGCATCTCGTACGCCTCGCTGATTCGTCTAGATCTGCCCAACGAGGCGCTCGACATCGTTTTGAAGCTGATCGACGAGCTGCGACTCTTCTGCCTCACGACCATCCTCAAAAAGGCCATCGAGAGGGTGAGGAAGCTGCACGAGAAGGAGACGTGGGAGCTGGCCGTGCACGAGTTTCCCGGCGCGACCTCGCTGCCCGGGAAGCTCGAGGAGCTCCTCGCCGAGGTCCTGGACGAGGGCCAGCAGATGTGCCTGCAGATGGAGGTGCGCGAAAACCCGCTCTTCGACGTGCCCAACTCGGAGGGCCATCGGGAGGTGGCGAAAATCGTCGAGACGATCCTCGAGGTTTTCAGCACGGTGATCGAGGAGCTCGCGACGGAGCGCTCCGACGATGAGATTCAGCAACTGCCGAAGCAGGCGATCTCGGGCTTCCCGGTCAACAGCAGCCTCCTCCCGCACTCGATAAATCTGAGCGAGGCAAAGTCCACGATAAGCTCCACAATCACCATCACGTGGGAGCACCGGCTGCTGTGCTGCCTCGCCAACGCCGCCTACTGCAACAAGACCTTCATCAACAACAACCTGGGCAGTCTCTTCGTGAAGTTCGGCTACCCGGTGCCGAAGCTGGCACTCGAGAACTCGCGCTCCAAGGTCAACGCGGTGTTCTCGAACCTGCTCGAGATCTACGTGGAGCACAAGGCCGATCCGCTCGTGTCGACCATCGAGCCGAGCATGTACATTGTGTCGCACTTCAAGTGGGATTGCGTCGAGAAATTCGACAATCTCAGCCCGTACGCTCACGAGTGCCTCGACAACGTGGTCGCCGTTTATTCGGAAATTTTCGCCGTCTCGCCCTTCCTGCTGAGGCCGATTTTGGAGCAGATCATACAGACGATAGCCGAGGAGTTGGCGCGCTTGATGGCGAGCGTCGACGGCTTCAATACGAACGGAAGGAAGCAAGCGACGCTCGACATCAAAATGATACGCGACGTGCTGCGGCTGTACAGCAATGAACGTGCAAAATCGTCGTTCAATGAGGCGCTCGATGCAATTCCGAAGCTCACGGCCGACGAAAACAAAGACGTGGAGGCTTTGCTCGTGAACATAAAACAGCGAATGAAAATACAACTTATGTGCTTGACTGTCGTTAATCCC
Protein: 900 (aa)
MAPPPLVTGISPKEGPPGTKITIRGENLGSRANDLIAVEICGGECSFEWVSKNKIIARTGISGQKGKGDVVVTTLSGGTGSSTVQFRTYIETIGPLKESAVWVDESPVQSLAWGRRTMATSGYHTADDPLGLSIEGNDKKFPDDLREIFPENSGDLSRENFSPCWFLLENHHATSFDDLRAGYSYLKRKVEGQKEGQLSFLKTHVGAVIDQLDTMMNLKQKMDNDGDVDIAQRVHNLQDTITKSIDSSHALFDDVLKRREKADKSRAALSVLNRYKFLFCLPTNIEKNASKNEFDIIVNDYARAKNLYGKSDIPLIQRVLAEVDEIILEVRKELHKKIQEMPQGVEQQKRFVKSLINLEIQQIGTKQAEKLKITDPAWDAIASRARYIEETFKRTYEEFQERESQQKESTKRDQGSPPIRVLFCEEITEIATGQFPDLWRLGQSYFTGELRGINEPKPGNFKQIILNAIERFCCYVRAAILPQNKKFASVPSWLFASPSQLSLFSTWLPTCLRYLRISYASLIRLDLPNEALDIVLKLIDELRLFCLTTILKKAIERVRKLHEKETWELAVHEFPGATSLPGKLEELLAEVLDEGQQMCLQMEVRENPLFDVPNSEGHREVAKIVETILEVFSTVIEELATERSDDEIQQLPKQAISGFPVNSSLLPHSINLSEAKSTISSTITITWEHRLLCCLANAAYCNKTFINNNLGSLFVKFGYPVPKLALENSRSKVNAVFSNLLEIYVEHKADPLVSTIEPSMYIVSHFKWDCVEKFDNLSPYAHECLDNVVAVYSEIFAVSPFLLRPILEQIIQTIAEELARLMASVDGFNTNGRKQATLDIKMIRDVLRLYSNERAKSSFNEALDAIPKLTADENKDVEALLVNIKQRMKIQLMCLTVVNP
| Type | Start | End | Length |
| CDS |
9090 |
9138 |
49 |
| CDS |
9208 |
9885 |
678 |
| CDS |
9948 |
11844 |
1897 |
| CDS |
12463 |
12538 |
76 |
| intron |
9139 |
9207 |
69 |
| intron |
9886 |
9947 |
62 |
| intron |
11845 |
12462 |
618 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_001843214 |
exocyst complex component 2 [Culex quinquefasciatus] gb|EDS31273.1| exocyst complex component 2 [Culex quinquefasciatus] |
0.0 |
| InterPro |
IPR013783 |
Immunoglobulin-like fold |
|
| InterPro |
IPR014756 |
Immunoglobulin E-set |
|
| InterPro |
IPR002909 |
Cell surface receptor IPT/TIG |
|
| Gene Ontology(MF) |
GO:0005515 |
protein binding |
|
| Pfam |
PF07889.7 |
Protein of unknown function (DUF1664) |
0.018 |
| Pfam |
PF01833.19 |
IPT/TIG domain |
2.2e-10 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| B. mori |
BGIBMGA003392-TA |
| S. invicta |
SI2.2.0_04460 |
| H. sapiens |
ENSP00000398113 |
| H. sapiens |
ENSP00000230449 |
| H. melpomene |
HMEL015262-PA |
| P. humanus |
PHUM379640-PA |
| A. gambiae |
AGAP001733 |
| D. melanogaster |
FBgn0031537 |
| A. aegypti |
AAEL009926 |
| C. quinquefasciatus |
CPIJ001674 |
| T. castaneum |
TC004683 |
| A. mellifera |
GB16409-PA |
| D. plexippus |
DPOGS208726PA |
| M. musculus |
ENSMUSG00000021357 |
| N. vitripennis |
NV13029-PA |
| P. vanderplanki |
Pv.05612 |