MidgeBase gene description page [Pn.13936]
Outline
| Gene ID | Pn.13936 |
| Type | Protein coding gene |
| Scaffold | PnScaf21728 |
| Start | 8785 |
| End | 10391 |
| Direction | - |
Sequence
Transcript: 1437 (bp)
ATGAGCTTAAATTTTAAAAAGAAATTCGATCTTTTGAAAGACCTAAAAATTCCTCACGTCAAACCAAAGTTTTTTTTCGGTAACATCAAAGATTTCGGCGATCAATTCTTTCATATTGAGTTTTTTCGAAATGTTTACGAAAACTTAAAAAGTGAAGGCCCGGTGGTTGGCACTTATGTTTATTCCCAGCCAATTGTTGTGGTAACGGACTTGGACATCGCAAAAGATATCCTCTTAAAAAATTTCGATAACTTTCCAAATCGTGGAATTTATTACGATGAAAAGCATGATCCAGCATCGGCTCACCTCGTTCATTTGGAGGATGACAAATGGAGAACTTTAAGGAAGAAAATCACGCCAACTTTCACGAGTGGCAAAATCAAAATGATGACGTCTATCATTCTGAAACTCACAGAAAGACTTGTCAAGGCAATCGACGAAGAATCTTCGGAAACAAGCTCCATAGAGCTCAAGTGCATTGTGTCGAGATTGACGACAGACGTGATCGGAAAAATTGGATTTGGCATTGAATGCAACTCGCTCCAAGACAAAACTGCCGAGTTCTACAGATACGGAATCAAAAATTTCTCAAATTTTAATTTCTTGAAAGTTCTCGTGAGATCAAGCTTTCCCAAAATTGCAAAGATGTTGCGCATGAAGGCAATAGATCCCGAAATTTCAGCATTTTACAAGCGAATAGTTGAGGAGACAATCAAGTATCGCGAGGACCAAAGCATCCAGGAACCAGATTTCATGACTTTAATGATGAATCTTATGAAATCACCCGATCCGACCGTCTCTATGACTTTCAATGAGGTTTGGGCTCAAGCAACAGTATTTTTCTTGGCAGGCTTTGAGACAACTGCCACGACCATCTCCTACTGCATTTACGAGCTGTCAATGAACAAAGAAGTTCAGATGAAGGTCAGGAATTCTGTAAAAAAGGTTCTTGAGAAGCACAGAAATGAATTTTCCTATGATGCAGTCGGTGACATGGACTACCTCGAAATGTGCCTTAACGAAACCATGAGAAAATATCCGCCCTTCACTAATTTGAGAAGAATCGCGAAGAATGACTACAAAGTTCCTGGCACCAATTCAACAATTAAGAAGGGTATGACGGTTCTCATCTCGGTATACGCAATTCACCACGACACCGACTATTTCCCGAACCCCGAGACGTTCGATCCCGAGCGCTTTTCGCCCGAGAACTCATCGAGACGACACAACTTTGCCTTTCTGCCCTTCGGCGAGGGTCCACGTACTTGCATTGCAAACCGCTTCGCAATGGTCGAACTGAAGCTCATTCTTTCGAAGCTCCTTATGACCTTCGAGTTTGAACTTGACAGATCGAGGACAATCACACCGCTTCAATTTGATAGGAACAAAATAATCCTGACATCGACCGATGAAATTTTCGTGAAATTCACCCGCTTG
Protein: 479 (aa)
MSLNFKKKFDLLKDLKIPHVKPKFFFGNIKDFGDQFFHIEFFRNVYENLKSEGPVVGTYVYSQPIVVVTDLDIAKDILLKNFDNFPNRGIYYDEKHDPASAHLVHLEDDKWRTLRKKITPTFTSGKIKMMTSIILKLTERLVKAIDEESSETSSIELKCIVSRLTTDVIGKIGFGIECNSLQDKTAEFYRYGIKNFSNFNFLKVLVRSSFPKIAKMLRMKAIDPEISAFYKRIVEETIKYREDQSIQEPDFMTLMMNLMKSPDPTVSMTFNEVWAQATVFFLAGFETTATTISYCIYELSMNKEVQMKVRNSVKKVLEKHRNEFSYDAVGDMDYLEMCLNETMRKYPPFTNLRRIAKNDYKVPGTNSTIKKGMTVLISVYAIHHDTDYFPNPETFDPERFSPENSSRRHNFAFLPFGEGPRTCIANRFAMVELKLILSKLLMTFEFELDRSRTITPLQFDRNKIILTSTDEIFVKFTRL
| Type | Start | End | Length |
| CDS |
8788 |
8961 |
174 |
| CDS |
9025 |
9173 |
149 |
| CDS |
9226 |
9318 |
93 |
| CDS |
9371 |
10391 |
1021 |
| intron |
8962 |
9024 |
63 |
| intron |
9174 |
9225 |
52 |
| intron |
9319 |
9370 |
52 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_001653677 |
cytochrome P450 [Aedes aegypti] gb|EAT39034.1| cytochrome P450 [Aedes aegypti] |
1e-119 |
| InterPro |
IPR001128 |
Cytochrome P450 |
|
| InterPro |
IPR017972 |
Cytochrome P450, conserved site |
|
| InterPro |
IPR002401 |
Cytochrome P450, E-class, group I |
|
| Gene Ontology(BP) |
GO:0055114 |
oxidation-reduction process |
|
| Gene Ontology(MF) |
GO:0009055 |
electron carrier activity |
|
| Gene Ontology(MF) |
GO:0020037 |
heme binding |
|
| Gene Ontology(MF) |
GO:0016705 |
oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen |
|
| Gene Ontology(MF) |
GO:0005506 |
iron ion binding |
|
| Pfam |
PF03963.9 |
Flagellar hook capping protein - N-terminal region |
0.043 |
| Pfam |
PF00067.17 |
Cytochrome P450 |
1.1e-102 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
| Gene ID |
| Pn.13940 |
| Pn.13937 |
| Pn.13939 |
Orthologous genes
| Species |
Gene ID |
| P. vanderplanki |
Pv.16768 |
| P. vanderplanki |
Pv.16769 |