MidgeBase gene description page [Pn.13933]
Outline
| Gene ID | Pn.13933 |
| Type | Protein coding gene |
| Scaffold | PnScaf21728 |
| Start | 33 |
| End | 1693 |
| Direction | - |
Sequence
Transcript: 1227 (bp)
ATGGCGAGCGATAGCGACTCTAAGACAGCCGGCGGACGCGGTGTGAACTTCGAGATAAGTCAATCCGTGACGATGAAAAAGTACGACATGGTAAACGAGGTGATAAGGCTGTGCTCGAGCAACGTCGAATACTATGCGAGCGACAAGTCGTTTGTCGGCACGAAAATGCACCAAAGCTTCGAGAAACTCGCCGAGTTCCTCACGCAAGCGGTGCCGGTCGTCCGCAAGATTGAGGGCTTCGCGTCGCTCTACGACTTCGATGAGAAGACGCCGGGAAATGGCTATCGCAGCTTCGTCCACATCTTCGACTGTGCTGTCCAATACTCGCTCAGCCACTGCCAGTACATCACCGAAAACCGCGCCAGTCTTCTCTTCCGCAAGAGCCTCTACCTCAAGGAAATCGAAGTGTGCGCGCAGCTCATCGAGAGCCTCCATTACATCTGCAGCGATCTCGTGAAAATGCACGAAAACTCGGTCGACGGCAATTTGTACTCGCGCGAGTGGTCGCACGACAACCTTATCACGCGCGGCGCGAAGGTCATCAATCAGACGTGCTTCTATGGACGCGCAGTTGGCTTTCAGTTCGTCGACTCGCTCAAAAGCATCCTCAAGTTTCTGACTGTGACGCTGGCGTGCTTCTCCGAGGCTTACTTCAGCAGCGGCTTCAAATTCATGCGCACGACCAGCTACTTCCTCAAGCACCCTTCGTACTTCCTCGATCCCGAAATGTGCGCCCGCCGCATCATCAACGTCAGCCACAATGCGGACGTCAAGTTCTGCAAGTCATTCTGGATGCTCGGCGAGAGCAAGCTCATGCACGCGATGCCGCGACTCGTCGGTTACAAAGTCGACATCAATCGTGTATTTAAAATTCCGCCCGAACCGCTGCAAATTTACAGCGAAAAACTCGGTAAAATGATTGATATTCCGGTGCCGCACAGCCACGTTGGAAAGGAGCCAGTGTCGTGTCGTTTGCTGTGCGCTCGTCACCGCAAGGGAATGGTCGGCGAGAGAGAGGCGGGCGGTAATCTTCCCGAGCCCTCGAAGTACCTGATCATCCACACTCATGGCGGGGGTTGGATTGCGACCAGCTCCAAAACGCGTAGGAATTTTTGTGAAATCCAAGGGATGGACACTTTAGGAAACTTTTTACTCATTTTTTTAGAGAAATTATTGGAAATCTTTCAATTTTTAGAAAAATTTTTAAACATTTTTAATCACAAATAT
Protein: 409 (aa)
MASDSDSKTAGGRGVNFEISQSVTMKKYDMVNEVIRLCSSNVEYYASDKSFVGTKMHQSFEKLAEFLTQAVPVVRKIEGFASLYDFDEKTPGNGYRSFVHIFDCAVQYSLSHCQYITENRASLLFRKSLYLKEIEVCAQLIESLHYICSDLVKMHENSVDGNLYSREWSHDNLITRGAKVINQTCFYGRAVGFQFVDSLKSILKFLTVTLACFSEAYFSSGFKFMRTTSYFLKHPSYFLDPEMCARRIINVSHNADVKFCKSFWMLGESKLMHAMPRLVGYKVDINRVFKIPPEPLQIYSEKLGKMIDIPVPHSHVGKEPVSCRLLCARHRKGMVGEREAGGNLPEPSKYLIIHTHGGGWIATSSKTRRNFCEIQGMDTLGNFLLIFLEKLLEIFQFLEKFLNIFNHKY
| Type | Start | End | Length |
| CDS |
36 |
188 |
153 |
| CDS |
272 |
562 |
291 |
| CDS |
838 |
1225 |
388 |
| CDS |
1299 |
1693 |
395 |
| intron |
189 |
271 |
83 |
| intron |
563 |
837 |
275 |
| intron |
1226 |
1298 |
73 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_001651348 |
triacylglycerol lipase [Aedes aegypti] gb|EAT42820.1| triacylglycerol lipase [Aedes aegypti] |
1e-84 |
| InterPro |
IPR010468 |
Hormone-sensitive lipase, N-terminal |
|
| Gene Ontology(BP) |
GO:0016042 |
lipid catabolic process |
|
| Gene Ontology(BP) |
GO:0008203 |
cholesterol metabolic process |
|
| Gene Ontology(MF) |
GO:0016298 |
lipase activity |
|
| Pfam |
PF06350.7 |
Hormone-sensitive lipase (HSL) N-terminus |
7.3e-96 |
| Pfam |
PF07859.8 |
alpha/beta hydrolase fold |
0.047 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
| Gene ID |
| Pn.13949 |
| Pn.13506 |
Orthologous genes
| Species |
Gene ID |
| P. vanderplanki |
Pv.05611 |
| D. melanogaster |
FBgn0034491 |
| T. castaneum |
TC008216 |
| M. musculus |
ENSMUSG00000003123 |
| N. vitripennis |
NV12945-PA |
| A. aegypti |
AAEL005706 |
| S. invicta |
SI2.2.0_07777 |
| A. gambiae |
AGAP002567 |
| P. vanderplanki |
Pv.16772 |
| H. sapiens |
ENSP00000244289 |
| C. quinquefasciatus |
CPIJ015981 |
| A. mellifera |
GB17559-PA |
| P. humanus |
PHUM288260-PA |
| D. plexippus |
DPOGS206593PA |