MidgeBase gene description page [Pn.13874]
Outline
| Gene ID | Pn.13874 |
| Type | Protein coding gene |
| Scaffold | PnScaf21542 |
| Start | 111 |
| End | 2219 |
| Direction | + |
Sequence
Transcript: 2049 (bp)
ATGATGGGACCGATTTTGAAGGATGAAGAAGTTTTCATTAGCGAGATTGTCACTAGCCAAGGGCAAGTTTTGGGGGCAATTGCGGCAGACGATCAAACAATCGCTCAGAGAGCAGCTCGATTGGTCAAGGTTGAATATGAAGAATTGAGTCCAGTAATTGTGACAATCGAAGACGCAATTGAAAACAATTCAGTTTTTGAAGGTTACCCGAAAATCTTGACTAAAGGCGATGCCGAAGGCAAATTGAAATTGGCGGAAAACATCGTTGAAGGCGAAGTTCGCGTAGGTGGCCAAGAACACTTTTATCTTGAAACACATGCAGCTATCGCCATTCCAAAGGAATGTGATGAACTTGAAATCATTGCCACCACTCAGCAGGCTTCCGCTAATCAGCAATACATTGCAGATATGCTCAAAATTCCTCTCAATAAAGTCGTCTGCAAAGTTAGGCGCATTGGTGGAGGATTTGGAGGAAAAGAGACGAGATCTGGCCTTATTGTGCGATTTGTGGCGATTGTAGCCTATAATTTAAGACGACCCGTGAGAATAATGTATGATCGAGACGAGGATATGATGATCACCGGCACGCGTCATCCATTCTTATTTAAGTACAAAGCAGGCTTTGACAATGATGGTAAAATAACGGCGCTTGATGTTAAAGCCTATTCCAATGCTGGATACTCACTGGACTTTAGCGGTCTCGTTATGGATCGTGCGATGTATCATGTTCAAAATGCCTACAGAGTCGATAACATCCGAGTTGAAGGAAACTGCATGAAAACAAACATTTCTTCGTGCACTGCCTTCAGGGGGTTCGGTTGCCCTCAAAGTATGCTGGTAGGTGAGAAAGTAGTAAGGGATATAGCAAGAAAATTGAACAGAGATATCATTGACATTATGAGCCTCAACTTACACTGCGATGGTGACGTGAAGTTCTTCAATCAAGTGCTTGAAAATTGCAACAACCATAGGTGCTTTGAAGAGGTACAAAAGAGTTCGAACTTTTTTGAAAGAAGAAAGAAAGTCGCGGATTTTAATGACAAAAACCGATGGAAGAAGCGCGGCATAAGTATCGTTAACACAACTTATGCGATTGGTTTCACTGAAAAATTTCTCAATCAGGGTGCTGCCCTTGTGCACGTCTACGTCGATGGCTCTGTTTTAATTTCACATGGCGGTATCGAAATGGGCCAAGGATTGTACGTAAAGACATTGCAGATTGCAGCATCGGTTTTCAAAATTCCCTTGGAGAAAATTTACATTCAGGAAGCTTCTACTGACAAAGTGCCTAATGCCACCGCGACAGTTGCATCGCTAGGCTCTGACCTTTACGGCGGAGCCATAATGAATGCATGCCAGATTCTGTACGATCGACTTGCTCCATATCGTAAACAGTCGCCAGAAGCCGGTTGGAATGAATGGGTAAAGACGGCCTACTTCGATCGAGTTTCGCTTTCGTCCACCGGTTTCTATGCAACATCCCAAATGGGCTACGAAATCAACAGACCTTACAATTATTTCACATTCGGTTCAGCCGTATCCGAGGTTGAAATAGATTGCCTTACCGGTGATAATCAAGTAATTAGAACAGATATTGTCATGGATGTAGGCAGCTCCATAAACCCCGCCATCGACATTGGACAAATTGAAGGAGCCTTCATGCAAGGCTACGGTCTGTACATGCTCGAGGAGCTGATTTATTCGCCGACAGGAACTTTGTACTCACGTGGTCCGAGAATGTATAAAATTCCAGGATTTGGAAACATTCCTGCCGAGTTTAATGTGTCGCTTCTCACGGGTGCACCAAACCCAAGGGCGGTTTATTCATCAAAGGCTATCGGTGAGCCGCCACTGTTCCTGGCCTCTTCAGTTTTCTTCGCGGTTAAGGAAGCCATTATTGCATCTAGAAGTGAAGAAGGACTTTCGAGAGACTTCTTTTTGCAGTGCCCAGCCACTTCGACGAGAATTCGAATGGCATGTCAGGACAAAATTACAAAGAAGTTCGTTGACGCTAAGAAAGAAGGCTATCGTTCATGGAACGTTGACGTT
Protein: 683 (aa)
MMGPILKDEEVFISEIVTSQGQVLGAIAADDQTIAQRAARLVKVEYEELSPVIVTIEDAIENNSVFEGYPKILTKGDAEGKLKLAENIVEGEVRVGGQEHFYLETHAAIAIPKECDELEIIATTQQASANQQYIADMLKIPLNKVVCKVRRIGGGFGGKETRSGLIVRFVAIVAYNLRRPVRIMYDRDEDMMITGTRHPFLFKYKAGFDNDGKITALDVKAYSNAGYSLDFSGLVMDRAMYHVQNAYRVDNIRVEGNCMKTNISSCTAFRGFGCPQSMLVGEKVVRDIARKLNRDIIDIMSLNLHCDGDVKFFNQVLENCNNHRCFEEVQKSSNFFERRKKVADFNDKNRWKKRGISIVNTTYAIGFTEKFLNQGAALVHVYVDGSVLISHGGIEMGQGLYVKTLQIAASVFKIPLEKIYIQEASTDKVPNATATVASLGSDLYGGAIMNACQILYDRLAPYRKQSPEAGWNEWVKTAYFDRVSLSSTGFYATSQMGYEINRPYNYFTFGSAVSEVEIDCLTGDNQVIRTDIVMDVGSSINPAIDIGQIEGAFMQGYGLYMLEELIYSPTGTLYSRGPRMYKIPGFGNIPAEFNVSLLTGAPNPRAVYSSKAIGEPPLFLASSVFFAVKEAIIASRSEEGLSRDFFLQCPATSTRIRMACQDKITKKFVDAKKEGYRSWNVDV
| Type | Start | End | Length |
| CDS |
111 |
2111 |
2001 |
| CDS |
2169 |
2216 |
48 |
| intron |
2112 |
2168 |
57 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_001846124 |
xanthine dehydrogenase [Culex quinquefasciatus] gb|EDS42575.1| xanthine dehydrogenase [Culex quinquefasciatus] |
0.0 |
| InterPro |
IPR000674 |
Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead |
|
| InterPro |
IPR008274 |
Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding |
|
| Gene Ontology(BP) |
GO:0055114 |
oxidation-reduction process |
|
| Gene Ontology(MF) |
GO:0016491 |
oxidoreductase activity |
|
| Pfam |
PF01315.17 |
Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain |
1.3e-10 |
| Pfam |
PF02738.13 |
Molybdopterin-binding domain of aldehyde dehydrogenase |
7.4e-184 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
| Gene ID |
| Pn.00988 |
| Pn.08540 |
| Pn.14146 |
| Pn.14305 |
| Pn.16491 |
| Pn.08772 |
Orthologous genes
| Species |
Gene ID |
| T. castaneum |
TC001978 |
| D. plexippus |
DPOGS205480PA |
| H. melpomene |
HMEL011575-PA |
| D. plexippus |
DPOGS204718PA |
| A. aegypti |
AAEL010380 |
| A. aegypti |
AAEL010370 |
| H. sapiens |
ENSP00000368727 |
| A. gambiae |
AGAP006221 |
| T. castaneum |
TC012131 |
| D. melanogaster |
FBgn0003308 |
| D. plexippus |
DPOGS208006PA |
| A. mellifera |
GB17045-PA |
| B. mori |
BGIBMGA008244-TA |
| A. aegypti |
AAEL002683 |
| P. vanderplanki |
Pv.05209 |
| P. vanderplanki |
Pv.00084 |
| N. vitripennis |
NV11547-PA |
| B. mori |
BGIBMGA008445-TA |
| A. aegypti |
AAEL010367 |
| D. plexippus |
DPOGS205813PA |
| A. gambiae |
AGAP006220 |
| D. plexippus |
DPOGS208007PA |
| D. plexippus |
DPOGS204714PA |
| M. musculus |
ENSMUSG00000024066 |
| N. vitripennis |
NV12674-PA |
| T. castaneum |
TC013628 |
| D. melanogaster |
FBgn0038347 |
| P. vanderplanki |
Pv.14266 |
| D. melanogaster |
FBgn0038349 |
| C. quinquefasciatus |
CPIJ013922 |
| P. vanderplanki |
Pv.15581 |
| A. aegypti |
AAEL010384 |
| D. melanogaster |
FBgn0038348 |
| C. quinquefasciatus |
CPIJ013934 |
| A. gambiae |
AGAP005638 |
| C. quinquefasciatus |
CPIJ017836 |
| D. plexippus |
DPOGS205814PA |
| H. sapiens |
ENSP00000363832 |
| N. vitripennis |
NV50063-PA |
| D. plexippus |
DPOGS200223PA |
| A. gambiae |
AGAP005636 |
| A. gambiae |
AGAP005637 |
| M. musculus |
ENSMUSG00000064294 |
| B. mori |
BGIBMGA010377-TA |
| C. quinquefasciatus |
CPIJ004121 |
| T. castaneum |
TC001977 |
| B. mori |
BGIBMGA008268-TA |
| H. melpomene |
HMEL017520-PA |
| C. quinquefasciatus |
CPIJ016888 |
| N. vitripennis |
NV12536-PA |
| N. vitripennis |
NV12673-PA |
| B. mori |
BGIBMGA008439-TA |
| A. aegypti |
AAEL010630 |
| A. mellifera |
GB16018-PA |
| P. humanus |
PHUM299090-PA |
| A. gambiae |
AGAP013758 |
| H. melpomene |
HMEL003020-PA |
| A. gambiae |
AGAP006226 |
| C. quinquefasciatus |
CPIJ802187 |
| N. vitripennis |
NV11546-PA |
| M. musculus |
ENSMUSG00000038242 |
| A. aegypti |
AAEL014493 |
| S. invicta |
SI2.2.0_11360 |
| A. gambiae |
AGAP007918 |
| C. quinquefasciatus |
CPIJ013921 |
| H. melpomene |
HMEL003018-PA |
| D. plexippus |
DPOGS210883PA |
| S. invicta |
SI2.2.0_01859 |
| D. melanogaster |
FBgn0038350 |
| A. aegypti |
AAEL006163 |
| A. aegypti |
AAEL017311 |
| S. invicta |
SI2.2.0_07033 |
| C. quinquefasciatus |
CPIJ013920 |
| M. musculus |
ENSMUSG00000063558 |
| A. aegypti |
AAEL010382 |
| A. aegypti |
AAEL010391 |
| B. mori |
BGIBMGA008421-TA |
| A. gambiae |
AGAP006224 |
| H. melpomene |
HMEL003019-PA |
| P. vanderplanki |
Pv.14267 |
| M. musculus |
ENSMUSG00000079554 |
| H. melpomene |
HMEL003022-PA |
| H. melpomene |
HMEL002194-PA |
| P. vanderplanki |
Pv.00085 |
| B. mori |
BGIBMGA008418-TA |
| A. aegypti |
AAEL006157 |
| C. quinquefasciatus |
CPIJ013919 |
| B. mori |
BGIBMGA008440-TA |
| S. invicta |
SI2.2.0_05661 |
| C. quinquefasciatus |
CPIJ016889 |
| C. quinquefasciatus |
CPIJ017835 |
| H. melpomene |
HMEL017529-PA |
| A. aegypti |
AAEL010372 |
| A. gambiae |
AGAP006225 |
| P. vanderplanki |
Pv.01733 |
| H. melpomene |
HMEL011718-PA |