MidgeBase gene description page [Pn.13868]
Outline
| Gene ID | Pn.13868 |
| Type | Protein coding gene |
| Scaffold | PnScaf21537 |
| Start | 21743 |
| End | 24476 |
| Direction | - |
Sequence
Transcript: 1452 (bp)
ATGGCATCTGCACAAAGAGAGGAACAACTATTGTTGGCACACAGTCGTTCCAATGGAACATCGATAGTGTCGAGTCGCAATGACTCTCGTGAGCCCGTGCGACTACAACCGGGCTGGGAGGATCGAAATCTGCCTGACGATGAGCTAAATTTCAAATCTATGACGATGGAGCGAGCCAAAATGGAATTGTCACCTCCCTCCGACAGATTCAACCTCATTTTGTTTATACTTATTCTTCACGGAATCGGAACGCTAACGCCATGGAACATGTTCATAACGGCCAAAGACTACTTTGTTGGCTACAAACTTTCCACCAATTACACTGGAACAAACAACACAGAGTATGCCGCGAACTTCATGCCGTATGTGACTTTCGCCTCGCAAATTCCGAATGTATTATTTAATTGGATGAACATTTTTGTCAATTTGGGAGGTGACCTCACTAAACGTGTCGTATGGAGTCTGATTATTGAAATAATAATTTTCCTCGTGACCGTTATTCTTGCCATGATTGACTCGTCGCAATGGCCGAGCGAGTTCTTCTGGATAACGATGGCTTGCGTGGTCGTTCTCAATATGTTTGGAGGAATTTTTCAAAACACCGTCTACGGAATGGCAGCCAAACTGCCACCAAAATACACGGGAGCCGTGGTTCTGGGATCAAACATCAGTGGAACGTTCGCTACCGTAATCAGCATTCTCAGCGGTTCAATTTGGTCATCGGTACGAAAGGCTGCGATCTATTACTTCATAACGGCCATGTTTGTTATTCTGTTGTGCTTTGACACCTATTTTGCAATGCCTTTAAACAAATTCTATCGCTACCACGAGATGAAGAGCGAGAAAGAGCAGGAAAAAATGCGACCTGGACAGATCGTAAACGCTCGGCCTCCATATTGGTCCATCTTCAAGAAGTCCGCTCCACAGCTCTTCAACGTCTTCTTCATCTTTTTCGTGACCTTGTCTGTGTTTCCAACAGTACACTCGGACATTAAGCAAGTGAGCGAAGGATATTTCTTGGGAATTGTATCGCCGTCATTCTTTGTGCCGATAACCTGCTTCCTGACATTTAATGTTTTCGCCATGCTCGGCAGTTTAGCAACGTCATGGATTCAATGGCCCTCACCAAAGTATCTCGTTTGGCCTGTGCTTCTACGAGCCGTATTCATCCCTCTGTTTCTTGCATGCAACTATCATCCGTTAGGAGTCGAGCGCGTTCTTCCTGTGTACATTAAAAATGATTACGTCTATTGGTCGATTGCTGTGGCCATGAGCTTTTCATCGGGATATCTAAGCTCATTGGCAATGATGTATGCACCCCGTGCACAAACAAACACACTTCATCAAATTAAAGCGGGAATGATGGCAGCCGCAATGCTTATTTCGGGCATTTTTGCAGGCATCATGTTTTCATTCACTGCACCGGTGTTTGTTAGATGGAACGTTGAATTT
Protein: 484 (aa)
MASAQREEQLLLAHSRSNGTSIVSSRNDSREPVRLQPGWEDRNLPDDELNFKSMTMERAKMELSPPSDRFNLILFILILHGIGTLTPWNMFITAKDYFVGYKLSTNYTGTNNTEYAANFMPYVTFASQIPNVLFNWMNIFVNLGGDLTKRVVWSLIIEIIIFLVTVILAMIDSSQWPSEFFWITMACVVVLNMFGGIFQNTVYGMAAKLPPKYTGAVVLGSNISGTFATVISILSGSIWSSVRKAAIYYFITAMFVILLCFDTYFAMPLNKFYRYHEMKSEKEQEKMRPGQIVNARPPYWSIFKKSAPQLFNVFFIFFVTLSVFPTVHSDIKQVSEGYFLGIVSPSFFVPITCFLTFNVFAMLGSLATSWIQWPSPKYLVWPVLLRAVFIPLFLACNYHPLGVERVLPVYIKNDYVYWSIAVAMSFSSGYLSSLAMMYAPRAQTNTLHQIKAGMMAAAMLISGIFAGIMFSFTAPVFVRWNVEF
| Type | Start | End | Length |
| CDS |
21746 |
22078 |
333 |
| CDS |
22164 |
22851 |
688 |
| CDS |
22957 |
23314 |
358 |
| CDS |
24404 |
24476 |
73 |
| intron |
22079 |
22163 |
85 |
| intron |
22852 |
22956 |
105 |
| intron |
23315 |
24403 |
1089 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_001847898 |
equilibrative nucleoside transporter [Culex quinquefasciatus] gb|EDS27140.1| equilibrative nucleoside transporter [Culex quinquefasciatus] |
1e-179 |
| InterPro |
IPR002259 |
Equilibrative nucleoside transporter |
|
| Gene Ontology(BP) |
GO:0006810 |
transport |
|
| Gene Ontology(CC) |
GO:0016021 |
integral to membrane |
|
| Gene Ontology(MF) |
GO:0005337 |
nucleoside transmembrane transporter activity |
|
| Pfam |
PF01733.13 |
Nucleoside transporter |
2e-70 |
| Pfam |
PF07690.11 |
Major Facilitator Superfamily |
8.4e-05 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| A. gambiae |
AGAP003892 |
| D. plexippus |
DPOGS210022PA |
| H. melpomene |
HMEL002087-PA |
| S. invicta |
SI2.2.0_13768 |
| B. mori |
BGIBMGA010837-TA |
| A. aegypti |
AAEL005411 |
| P. humanus |
PHUM548930-PA |
| A. mellifera |
GB17929-PA |
| D. melanogaster |
FBgn0263916 |
| P. vanderplanki |
Pv.01904 |
| C. quinquefasciatus |
CPIJ006361 |
| T. castaneum |
TC012524 |
| N. vitripennis |
NV10643-PA |