MidgeBase gene description page [Pn.13853]
Outline
| Gene ID | Pn.13853 |
| Type | Protein coding gene |
| Scaffold | PnScaf21490 |
| Start | 5428 |
| End | 8326 |
| Direction | - |
Sequence
Transcript: 1995 (bp)
ATGGACGTCTATTTCAGCGACCAAGTCAACGATCCCTCGCTGCGCCTCTTCTCGTCCACAAAGCGCTTCGACACCGACACCTTCGACGACAAGAACTTCGACGAGGAGCTGCAGGCCGTGCTCGCAGCCGCCAATCTCAACGCGTCCATGTCGTCGGTGCTGTCGAACCTCGGCCTCGGCCTCGGCATGAACCGACAGAGCTTCCTCAAGCGCGACTCAAATCTCACGCCCAACAACAACAACAACAACAATAATAACAACAACAGCAACAACAACAACATCAACAATCCGATGGAGATCGACGACAAGCTGGTCGAGGACGACGAGGACGACACCAAGTCGGAGGCGTCGATCAACTTGAGCACGAAACTCCTCGGCAACAGCCTCATGAGCTCGTCGCCCAACGCCACCATCAATCACGACAAAAACAACAACAAAAGTCATCTCACGAGCCTCAACACCAGCAGCAAACTCAGCGACAGCCACCTCGGCAAGGACGCGAAAGACGTCGGCCTCAGTCTCATCAGCGAGCCCAACAACAACAACACACTCAACAGCAACCGCAACCTCATGGGCAGCAACGCAAGCTACAGCACGAGCATCAGCGACGGCAGCATCAACAGCAGTCGAGTGAACAGCGCGAGCAGCCACGCGAACATCAACGACGACGACTACGAGGACAACATGGTGCGCGCATACGAGCGCAACCTCAAGAATCTGAACCAGAAGTTCTTGCACGAGATGAACGAGCACCACAACATCGACCAGTATTTGCTGTCGTGGCGCGGCTTTCACGGCAACATGTGCAAGGGCTTTCACAATTTGCAGCGCGACGGACAAATGGTCGATGTCACCATCGCGGCCGGCGGAAAGATCTTCAAGGCGCACAAGCTCGTTCTGTCCGTTTGCAGTCCGTACTTTCAAAAGATTTTTATCGAACATCCGTCATCGCATCCGATCCTGTTTATGACCGATGTCAATAGCAATCACATGGCCGGATTGCTGGACTTCATGTACAGTGGACAGGTCAACGTAAAATATGAAGATCTACCGAATTTTTTGAAAGTTGCTGAGGCGCTTCAAGTCAAGGGGCTCCACGGCGAGAGCACGGCCGACAACGAGGAGCGAGAGCGCGAACGCGAGCGCGAGGAGAGCAACTATGCGATGCAGTACCGGCAGCAGCAGCAGCAGCAGGCGATGCACTTACAGCAGCAGCAACAGCAGTTCAACTACAGTCAACACATGCGCCAGCCAGCACCCGCTCACTTCCAACATCCCGACAACATCATCAACGAGAACCGGCAGAACATTCGGCACCACATCAAGCCCAAGACGTCGCTCATCAACAGTAGCACCAGCGCCAACAACAACAACAACAACCCCGACACGACCACCATGAACATGACCAGCAACAACAACAACAATCCGAGCACGACCAACAACAACTTGTCCGCCCTCGCCAACAACAACAACAACAATGGCGGCGGCTTGCAGCACCAGAAGTTCGGCGTGCAGCAGGTCAACTCGAGCAGCAAGATGCTGGACAATCAAAAGTACCAGAAGTACTTCGCGAAGCGGAAACTGCTCGCGCAGTACGAGCAAGAGATGAGGCAGGAGAAGCGCAACCGATCCGGCGACAGCATCGACGACGACGACGACAGCAACCGGCCGCTGAATATGCGCCGCTCGACAGACGACGACAACGGCAAGGCGATCAACAACAACAACAACTGCGTCGGACTCAATCTCATACAGAACATCAAGACGGAGAAGGGCGACGAGCACGAGGCGCAGCACCCGGACGTGAACGGCAACGACGAGGAGACGACCACGACGGGCTTCTACGGCACGCACCTGAGCAAGATGAAACATTCCATTCTCGAACCGAACATAGTATTACAGCACAGCGATGAAGTCATTTCGCCCTCGAATGGCAACAGCAACTCCATCACGAGTACATTGCAGAATACAAATTTAAGTCAGAAGACGGCGAGC
Protein: 665 (aa)
MDVYFSDQVNDPSLRLFSSTKRFDTDTFDDKNFDEELQAVLAAANLNASMSSVLSNLGLGLGMNRQSFLKRDSNLTPNNNNNNNNNNNSNNNNINNPMEIDDKLVEDDEDDTKSEASINLSTKLLGNSLMSSSPNATINHDKNNNKSHLTSLNTSSKLSDSHLGKDAKDVGLSLISEPNNNNTLNSNRNLMGSNASYSTSISDGSINSSRVNSASSHANINDDDYEDNMVRAYERNLKNLNQKFLHEMNEHHNIDQYLLSWRGFHGNMCKGFHNLQRDGQMVDVTIAAGGKIFKAHKLVLSVCSPYFQKIFIEHPSSHPILFMTDVNSNHMAGLLDFMYSGQVNVKYEDLPNFLKVAEALQVKGLHGESTADNEEREREREREESNYAMQYRQQQQQQAMHLQQQQQQFNYSQHMRQPAPAHFQHPDNIINENRQNIRHHIKPKTSLINSSTSANNNNNNPDTTTMNMTSNNNNNPSTTNNNLSALANNNNNNGGGLQHQKFGVQQVNSSSKMLDNQKYQKYFAKRKLLAQYEQEMRQEKRNRSGDSIDDDDDSNRPLNMRRSTDDDNGKAINNNNNCVGLNLIQNIKTEKGDEHEAQHPDVNGNDEETTTTGFYGTHLSKMKHSILEPNIVLQHSDEVISPSNGNSNSITSTLQNTNLSQKTAS
| Type | Start | End | Length |
| CDS |
5431 |
6321 |
891 |
| CDS |
6421 |
6498 |
78 |
| CDS |
6842 |
6973 |
132 |
| CDS |
7433 |
8326 |
894 |
| intron |
6322 |
6420 |
99 |
| intron |
6499 |
6841 |
343 |
| intron |
6974 |
7432 |
459 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_313467 |
AGAP003685-PA [Anopheles gambiae str. PEST] gb|EAA08924.4| AGAP003685-PA [Anopheles gambiae str. PEST] |
1e-68 |
| InterPro |
IPR013069 |
BTB/POZ |
|
| InterPro |
IPR011333 |
BTB/POZ fold |
|
| InterPro |
IPR000210 |
BTB/POZ-like |
|
| Gene Ontology(MF) |
GO:0005515 |
protein binding |
|
| Pfam |
PF00651.26 |
BTB/POZ domain |
1.5e-21 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| P. vanderplanki |
Pv.12848 |