MidgeBase gene description page [Pn.13844]
Outline
| Gene ID | Pn.13844 |
| Type | Protein coding gene |
| Scaffold | PnScaf21377 |
| Start | 1417 |
| End | 7881 |
| Direction | + |
Sequence
Transcript: 963 (bp)
ATGTACGTCTTCGAGGAGATGATCGAGGGCAAGAAGTTGACCGAAATCATCAACACAACGCACGAGAATGTGAAGTACTTGCCCGGACACAAATTACCCGAAAATATCGTCGCCGTTCCGGACGTTGTTGAGGCAGCCAAGGATGCTGACATTCTCATCTTTGTCATTCCGCATCAGTTCATCAAGGGACTTGGCGCTCAGCTCGTCGGCAAGATCAAGCCAACGGCCATTGGACTCTCTCTCATCAAGGGCTTCGACATCGCCGAAGGCGGCGGCATCGAGCTCATCTCGAAGATCATCACAAAGCACCTCCAGATTCCGTGCGCGGTGCTGATGGGCGCGAACCTCGCCAACGAGGTGGCCGACGAGAAGTTCTGCGAGACGACCATCGGCGTGAAGGACAAGAAAATGGCGCCGATCTTGCGCGACCTCTTCCAGACGCCCAACTTCCGCGTGGTCGTGAGCGACGACGTCGACGCCGTCGAAATCTGCGGCGCCCTTAAGAACATCGTCGCCTGCGGCGCTGGCTTCACCGACGGCCTCGGACTCGGCGACAACACCAAGGCCGCCGTCATCCGTCTCGGCCTCATGGAGATGATCAAGTTCGTCGACGTCTTCTACCCGGGCAGCAAGCTCGCGACCTTCTTCGAGTCGTGCGGCGTCGCCGATCTCATCACCACGTGCTACGGCGGCCGCAACCGCAAGTGCAGCGAGGCCTTCGTCAAGACCGGCAAGAGCATCGCCGAGCTCGAGAAGGAAATGCTCAACGGCCAGAAGCTCCAGGGACCGATCACGGCCGCCGAGGTGAATGTCATGCTGAAGGCCAAGGGCATGGAGGACAAGTTCCCGCTCTTCACTGCCATCCACAGGATCTGCGTGGGCGAAATCAAGCCCGCCCAGATGATCGACTGCATCAGAAACCATCCCGAGCACATGGACTGTAGCGATGGCTTTGCGAAGCTT
Protein: 321 (aa)
MYVFEEMIEGKKLTEIINTTHENVKYLPGHKLPENIVAVPDVVEAAKDADILIFVIPHQFIKGLGAQLVGKIKPTAIGLSLIKGFDIAEGGGIELISKIITKHLQIPCAVLMGANLANEVADEKFCETTIGVKDKKMAPILRDLFQTPNFRVVVSDDVDAVEICGALKNIVACGAGFTDGLGLGDNTKAAVIRLGLMEMIKFVDVFYPGSKLATFFESCGVADLITTCYGGRNRKCSEAFVKTGKSIAELEKEMLNGQKLQGPITAAEVNVMLKAKGMEDKFPLFTAIHRICVGEIKPAQMIDCIRNHPEHMDCSDGFAKL
| Type | Start | End | Length |
| CDS |
1417 |
1524 |
108 |
| CDS |
3994 |
4090 |
97 |
| CDS |
4523 |
4632 |
110 |
| CDS |
4798 |
5265 |
468 |
| CDS |
5365 |
5516 |
152 |
| CDS |
7851 |
7878 |
28 |
| intron |
1525 |
3993 |
2469 |
| intron |
4091 |
4522 |
432 |
| intron |
4633 |
4797 |
165 |
| intron |
5266 |
5364 |
99 |
| intron |
5517 |
7850 |
2334 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_001653595 |
glycerol-3-phosphate dehydrogenase [Aedes aegypti] gb|EAT47333.1| glycerol-3-phosphate dehydrogenase [Aedes aegypti] |
1e-154 |
| InterPro |
IPR017751 |
Glycerol-3-phosphate dehydrogenase, NAD-dependent, eukaryotic |
|
| InterPro |
IPR008927 |
6-phosphogluconate dehydrogenase, C-terminal-like |
|
| InterPro |
IPR013328 |
Dehydrogenase, multihelical |
|
| InterPro |
IPR016040 |
NAD(P)-binding domain |
|
| InterPro |
IPR011128 |
Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal |
|
| InterPro |
IPR006109 |
Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal |
|
| InterPro |
IPR006168 |
Glycerol-3-phosphate dehydrogenase, NAD-dependent |
|
| Gene Ontology(BP) |
GO:0006072 |
glycerol-3-phosphate metabolic process |
|
| Gene Ontology(BP) |
GO:0046168 |
glycerol-3-phosphate catabolic process |
|
| Gene Ontology(BP) |
GO:0005975 |
carbohydrate metabolic process |
|
| Gene Ontology(BP) |
GO:0055114 |
oxidation-reduction process |
|
| Gene Ontology(CC) |
GO:0009331 |
glycerol-3-phosphate dehydrogenase complex |
|
| Gene Ontology(CC) |
GO:0005737 |
cytoplasm |
|
| Gene Ontology(MF) |
GO:0016614 |
oxidoreductase activity, acting on CH-OH group of donors |
|
| Gene Ontology(MF) |
GO:0016616 |
oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor |
|
| Gene Ontology(MF) |
GO:0051287 |
NAD binding |
|
| Gene Ontology(MF) |
GO:0042803 |
protein homodimerization activity |
|
| Gene Ontology(MF) |
GO:0004367 |
glycerol-3-phosphate dehydrogenase [NAD+] activity |
|
| Gene Ontology(MF) |
GO:0000166 |
nucleotide binding |
|
| Gene Ontology(MF) |
GO:0016491 |
oxidoreductase activity |
|
| Gene Ontology(MF) |
GO:0050662 |
coenzyme binding |
|
| Pfam |
PF07479.9 |
NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus |
9.2e-55 |
| Pfam |
PF01210.18 |
NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus |
1.1e-41 |
| Pfam |
PF04947.9 |
Poxvirus Late Transcription Factor VLTF3 like |
0.0018 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| H. sapiens |
ENSP00000446768 |
| P. vanderplanki |
Pv.12349 |
| T. castaneum |
TC000688 |
| M. musculus |
ENSMUSG00000023019 |
| D. plexippus |
DPOGS208883PA |
| N. vitripennis |
NV14099-PA |
| P. humanus |
PHUM174010-PA |
| P. vanderplanki |
Pv.13975 |
| D. melanogaster |
FBgn0001128 |
| S. invicta |
SI2.2.0_13688 |
| A. aegypti |
AAEL001593 |
| H. melpomene |
HMEL002642-PA |
| H. sapiens |
ENSP00000301149 |
| H. sapiens |
ENSP00000282541 |
| C. quinquefasciatus |
CPIJ000232 |
| S. invicta |
SI2.2.0_15005 |
| A. gambiae |
AGAP007593 |
| N. vitripennis |
NV14101-PA |
| M. musculus |
ENSMUSG00000050627 |
| A. mellifera |
GB20014-PA |
| B. mori |
BGIBMGA012560-TA |