MidgeBase gene description page [Pn.13743]
Outline
| Gene ID | Pn.13743 |
| Type | Protein coding gene |
| Scaffold | PnScaf20912 |
| Start | 575 |
| End | 1439 |
| Direction | + |
Sequence
Transcript: 657 (bp)
ATGTCCTTGGTACTATACTTTGCGCCGACTTCGCCGCCGTCGAGAGCCGTTCAGCTCACGCTCATGAACCTCGGCCTGGAGTATGAAGCAAATTTCATCAATGCGATGGCGGGCGAGCACAAGACGGAGGAGTTCCTGAAGATAAACCCGCAAGGGACGATTCCTGTGCTGGTTGACGACGATTTCGTGATGAACGAATCGCGTGCCATCTGTGCATACTTGGTTAACGCAAAGAGTCCCAACCACCCTCTCTATCCCGCGGACGACCCAAAGTTGCGCTTCATCATCGACCAGCGGATGTTCTACGACGCGAGCACCTTCACCCCCGCTCTCTATGCCGCCATCTCGCCGGTGATGCGCAAAGGTCAAACGGTCATTGATCCGAACGACAAGGAGCGCATCATTTCGTGCCTCAATACGCTCGAGGGATTCCTCGACGGCTTCGAGTGGTTCTCGACCACGGAAAATGCCTGCATTGCGGACTTGTCTATTCTGGCGAACTTCTCGACACTCTATCACGGCGGCTTAGACATCGCCGACTATCCCAACATTGCCGGCTGGTACGAGCGCTGCGCAAGCCTCCCCGGCTTCGAGGAGAATGAGAAGGGAGCCCGAATGTTCGGCGGAATGCTGAAGAGCAAATTGACGGAGCCGTTT
Protein: 219 (aa)
MSLVLYFAPTSPPSRAVQLTLMNLGLEYEANFINAMAGEHKTEEFLKINPQGTIPVLVDDDFVMNESRAICAYLVNAKSPNHPLYPADDPKLRFIIDQRMFYDASTFTPALYAAISPVMRKGQTVIDPNDKERIISCLNTLEGFLDGFEWFSTTENACIADLSILANFSTLYHGGLDIADYPNIAGWYERCASLPGFEENEKGARMFGGMLKSKLTEPF
| Type | Start | End | Length |
| CDS |
575 |
602 |
28 |
| CDS |
685 |
743 |
59 |
| CDS |
805 |
1062 |
258 |
| CDS |
1125 |
1436 |
312 |
| intron |
603 |
684 |
82 |
| intron |
744 |
804 |
61 |
| intron |
1063 |
1124 |
62 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_001654620 |
glutathione-s-transferase theta, gst [Aedes aegypti] gb|AAK64286.1|AF384858_1 glutathione S-transferase [Aedes aegypti] gb|EAT37531.1| glutathione-s-transferase theta, gst [Aedes aegypti] |
3e-62 |
| InterPro |
IPR010987 |
Glutathione S-transferase, C-terminal-like |
|
| InterPro |
IPR017933 |
Glutathione S-transferase/chloride channel, C-terminal |
|
| InterPro |
IPR004045 |
Glutathione S-transferase, N-terminal |
|
| InterPro |
IPR012336 |
Thioredoxin-like fold |
|
| Gene Ontology(MF) |
GO:0005515 |
protein binding |
|
| Pfam |
PF13409.1 |
Glutathione S-transferase, N-terminal domain |
1.2e-14 |
| Pfam |
PF02798.15 |
Glutathione S-transferase, N-terminal domain |
1.7e-14 |
| Pfam |
PF13417.1 |
Glutathione S-transferase, N-terminal domain |
5.5e-16 |
| Pfam |
PF00043.20 |
Glutathione S-transferase, C-terminal domain |
0.00017 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| A. aegypti |
AAEL010500 |
| A. gambiae |
AGAP009342 |
| P. vanderplanki |
Pv.01023 |
| T. castaneum |
TC009482 |
| P. humanus |
PHUM097960-PA |
| C. quinquefasciatus |
CPIJ014694 |
| P. vanderplanki |
Pv.14640 |
| D. plexippus |
DPOGS210477PA |