MidgeBase gene description page [Pn.13712]
Outline
| Gene ID | Pn.13712 |
| Type | Protein coding gene |
| Scaffold | PnScaf20816 |
| Start | 51 |
| End | 863 |
| Direction | - |
Sequence
Transcript: 381 (bp)
ATGTTTTCGAGAATTGTCAGTGCCTTCCAGTCGAAGCACGTCCAGCTGAACGAGTTGAAAAATGCAGCAATTATCACGCTCAACCGGCCCGAGAAGATGAACACCTTCACTCCCGAGATGCCAGATCAGCTGTTCAACATAATCAAGGATCTTGAGTCGTCGGACAAATCACACGTGATGATTCAGGGCGTAGGCAAGGCATTCAGTGCTGGCCTCGACCTAAAGGAGATCCTCTCGGTGCCAGAAAATGAGGTCGTGCGCCTGAACGTGGTCGCGGCCAAGTCGATGGACCTGATCGCCAACTACCGCAAGCCCTACGTTGCCCTCATCGACGGCATCTGCATGGGCGGCCGAGATCGGCTTCTTCACCAACGCGGGCGC
Protein: 127 (aa)
MFSRIVSAFQSKHVQLNELKNAAIITLNRPEKMNTFTPEMPDQLFNIIKDLESSDKSHVMIQGVGKAFSAGLDLKEILSVPENEVVRLNVVAAKSMDLIANYRKPYVALIDGICMGGRDRLLHQRGR
| Type | Start | End | Length |
| CDS |
54 |
85 |
32 |
| CDS |
157 |
253 |
97 |
| CDS |
535 |
661 |
127 |
| CDS |
739 |
863 |
125 |
| intron |
86 |
156 |
71 |
| intron |
254 |
534 |
281 |
| intron |
662 |
738 |
77 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
ADX86626 |
enoyl-CoA hydratase/isomerase [Sulfolobus islandicus REY15A] |
1e-12 |
| InterPro |
IPR001753 |
Crotonase, core |
|
| Gene Ontology(BP) |
GO:0008152 |
metabolic process |
|
| Gene Ontology(MF) |
GO:0003824 |
catalytic activity |
|
| Pfam |
PF00378.15 |
Enoyl-CoA hydratase/isomerase family |
7.1e-17 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes