MidgeBase gene description page [Pn.13703]
Outline
| Gene ID | Pn.13703 |
| Type | Protein coding gene |
| Scaffold | PnScaf20776 |
| Start | 1038 |
| End | 2644 |
| Direction | - |
Sequence
Transcript: 1386 (bp)
ATGGAGAACGAGATCATCGAAACGGCTCCCTTTTGGAGGAAGAAGCGATATTTGGTTGTGTTGCTGGCATTCTTCGGATTCTTCAATGTCTATGCGCTCCGAGTGAATCTCAGCGTCGCAATAGTGGCGATGACTGAAAATCGAACGGTCATCGACGAAGATGGCTCAGAGTCGTACGAGCAGCACTTCAACTGGAGCTCGCAGCAGAGAGGCCTTGTCCTCAGTTCCTTCTTCTACGGCTACATCACGACGCAGTTCATTGGCGGCTATTTGGCGTCGCGTTTCGGAGGAAATCTGATTTTCGGCATCGGCATCGGTGTCACTGCCTTCTTAACGCTCCTGACTCCTTTGGCTGCGAATTGGAGCATCTATGCGCTCGTTGCCGTGAGAGTCATTGAGGGAGTCTTCGAGGGAATGACCTTTCCCTGCTGCTACCACATCTGGAGCAAGTGGGCGCCGCCCTTAGAGCGCTCGCGGATGGCGAGCTTCGCGCTGGCCGGTAACTACGTCGGAACGGTCATCGGAATGCCGTTGTCGGGAATTTTCGCGACCTACATCGGATGGCAGAGTGTCTTCTACATTTTTGGCGCCATCGGCATCTTCTGGCTCGTCCTTTGGGTGCTCATCGTGAGATCCAGCCCGGAAGCCGATAAACGCATCTCAAAAGTCGAACGCGACTACATTTTAACGAGCATCGGCCGGAGCGCCGACGAAAAGCAGCCGAAGTTCCACGAAATTCCCTGGCGCGGAATTTTCACATCGAAGGCTGTTTGGGCGATTTCGTTGGCGACATTCTGCGAGTCGTGGGGATTTTTCACGATGTTCACGCAGCTGCCGACATTTTTTAAGGAAATGCTCAACTTTGACATCTCGAACTCGGCCTTTCTCTCCGCACTTCCCTACCTCGCGCTCTCCATTCTTCTCTTCGTGTCCGGCTTCCTCGCCGACTGGCTGCAAGTGAAGGACATCCTGAGCACCACGCAGGTCCGTCGCTACTTCACGTGCTGGTCATTTATGGCGCAAACAATCTTCATGATTCTCGCGGCCTTCATCCTGCACCGCGTCTATTCCGTCATTTTTCTCACAATTGGCGTGGGCTTGGGCGCGTTTTCGTTGTCGGGCTTCGCGATTAATCATCTGGATATCGCACCGCAGTATGCGTCGATTCTGTTCGGCATCGGCAACACAATGGGCACGATCCCGGGAATGGTCAGTCCACTGCTGACGGGCTTCATTGTCGCCAACTCGGAGGAGAGCGAGTGGCGGATTGTGTTTTACATTACGGCAGGACTTTACGTGGTTGGTGCCATCATTTATTGGCTCTTCTGTTCCGGGAAGGTGCAGCCGTGGGCTGTGAGGAAGAGCAACGATGTCAAGATGAGTTTA
Protein: 462 (aa)
MENEIIETAPFWRKKRYLVVLLAFFGFFNVYALRVNLSVAIVAMTENRTVIDEDGSESYEQHFNWSSQQRGLVLSSFFYGYITTQFIGGYLASRFGGNLIFGIGIGVTAFLTLLTPLAANWSIYALVAVRVIEGVFEGMTFPCCYHIWSKWAPPLERSRMASFALAGNYVGTVIGMPLSGIFATYIGWQSVFYIFGAIGIFWLVLWVLIVRSSPEADKRISKVERDYILTSIGRSADEKQPKFHEIPWRGIFTSKAVWAISLATFCESWGFFTMFTQLPTFFKEMLNFDISNSAFLSALPYLALSILLFVSGFLADWLQVKDILSTTQVRRYFTCWSFMAQTIFMILAAFILHRVYSVIFLTIGVGLGAFSLSGFAINHLDIAPQYASILFGIGNTMGTIPGMVSPLLTGFIVANSEESEWRIVFYITAGLYVVGAIIYWLFCSGKVQPWAVRKSNDVKMSL
| Type | Start | End | Length |
| CDS |
1041 |
1178 |
138 |
| CDS |
1237 |
2018 |
782 |
| CDS |
2069 |
2421 |
353 |
| CDS |
2476 |
2574 |
99 |
| CDS |
2631 |
2644 |
14 |
| intron |
1179 |
1236 |
58 |
| intron |
2019 |
2068 |
50 |
| intron |
2422 |
2475 |
54 |
| intron |
2575 |
2630 |
56 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_002053996 |
GJ24194 [Drosophila virilis] gb|EDW67516.1| GJ24194 [Drosophila virilis] |
1e-168 |
| InterPro |
IPR020846 |
Major facilitator superfamily domain |
|
| InterPro |
IPR011701 |
Major facilitator superfamily |
|
| InterPro |
IPR016196 |
Major facilitator superfamily domain, general substrate transporter |
|
| Gene Ontology(BP) |
GO:0055085 |
transmembrane transport |
|
| Gene Ontology(CC) |
GO:0016021 |
integral to membrane |
|
| Pfam |
PF10183.4 |
ESSS subunit of NADH:ubiquinone oxidoreductase (complex I) |
8.8 |
| Pfam |
PF00083.19 |
Sugar (and other) transporter |
2.6e-09 |
| Pfam |
PF07690.11 |
Major Facilitator Superfamily |
1.5e-60 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
| Gene ID |
| Pn.08311 |
| Pn.13704 |
Orthologous genes
| Species |
Gene ID |
| N. vitripennis |
NV17997-PA |
| N. vitripennis |
NV17996-PA |
| C. quinquefasciatus |
CPIJ007436 |
| A. aegypti |
AAEL004256 |
| A. gambiae |
AGAP006595 |
| C. quinquefasciatus |
CPIJ007435 |
| C. quinquefasciatus |
CPIJ007431 |
| A. aegypti |
AAEL004268 |
| P. vanderplanki |
Pv.11409 |
| B. mori |
BGIBMGA010861-TA |
| C. quinquefasciatus |
CPIJ007429 |
| A. mellifera |
GB17692-PA |
| P. humanus |
PHUM426610-PA |
| N. vitripennis |
NV15187-PA |
| P. vanderplanki |
Pv.12044 |
| T. castaneum |
TC010895 |
| P. humanus |
PHUM601610-PA |
| C. quinquefasciatus |
CPIJ007430 |
| D. melanogaster |
FBgn0038799 |
| C. quinquefasciatus |
CPIJ007434 |
| C. quinquefasciatus |
CPIJ007428 |
| D. plexippus |
DPOGS211401PA |
| A. aegypti |
AAEL004247 |
| A. aegypti |
AAEL004836 |
| H. sapiens |
ENSP00000348019 |
| A. gambiae |
AGAP006594 |
| P. vanderplanki |
Pv.11410 |