MidgeBase gene description page [Pn.13425]
Outline
| Gene ID | Pn.13425 |
| Type | Protein coding gene |
| Scaffold | PnScaf19533 |
| Start | 1646 |
| End | 4249 |
| Direction | - |
Sequence
Transcript: 1209 (bp)
ATGAGGTTAGACTGTGTGCATGCAAACAATGGCGAATCTTTCTTTCTCCCTCTTCGCACAGCGACATTCCTCGCAACGCTCATATTTCTGGCGGCCGCAGGAAACATTCTCGTGTGCCTCGCTATCGCTACAGAGCGAAGTCTGCGGCGTATCGGAAACTTATTTCTCGCCTCGCTTGCAATAGCCGACCTGTTCGTATCGATTCTCGTGATGACGTTCGCCAGTGTAAATGACATTTTAGGATATTGGATTTTCGGTGCTGAATTCTGCGATACGTGGATCGCATTCGATGTCATGTGCTCGACATCATCAATTTTAAATTTGTGCGCGATTTCGTTAGATCGCTACATTCACATAAAAGATCCCCTCAGATACACACGGTGGGTGACGCGACGCGTTGCAATCGCAACGATAGCTGCAATTTGGATGCTCGCTGCCTTTGTCTCCTTCGTACCAATATCGCTAGGCCTTCATCGACCCAACGAGCCCCTAATCATTGAGATTCGCAACGGCGTCGAGTACCCGACATGTGCGCTCGACTTGACGCCAACTTACGCCGTGGTCTCGAGCTGTATCAGCTTCTATCTACCGTGTGTCGTTCTCGTAGGGATTTATTGCAGACTGTATTGCTATGCACAAAAGCATGTGCGATCGATTCGGGCTGTCACGCGAACAAACGCCGATGACCTGCAGCAGCAGCAGCAGCAGCAGCAACAGCAACAGTATCAGCGCAATGCAGTTAATCGTCGTAATGGAAACGGTTGCAGCACGCCTATGGGAAAGAGCAAGAAGAAGAAGTCAAAGCGCTCGCCTCATCAATTAGCAGCCTATCACACGTCAGATAGAAAGGCAGCTGTCACCGTTGGCGTCATAATGGGCGTCTTTCTCGTGTGTTGGATGCCGTTCTTTTGCGTGAACATCGTGGCAGCCTTCTGCAAGACCTGCATCGGCGAGACGACGTTCAAAGTCCTCTCGTGGCTCGGCTACTCGAATTCCGTCTTCAACCCGATCATTTATTCGATATTCAATACGGAGTTTCGCAAGGCGTTCAAGCGAATCCTTCTGAGACGACAGCTGCCGAAGCTGCTGTGCTGCGGGACGTTCCAGAACGAGTATTACGTCAACAGTTCGAACGATAGCAAATTCATCACCAATTACGAAGCAAAGTTCTTGCACTCAACGACAGATGTGGAGCAGTTGTCGGCCATT
Protein: 403 (aa)
MRLDCVHANNGESFFLPLRTATFLATLIFLAAAGNILVCLAIATERSLRRIGNLFLASLAIADLFVSILVMTFASVNDILGYWIFGAEFCDTWIAFDVMCSTSSILNLCAISLDRYIHIKDPLRYTRWVTRRVAIATIAAIWMLAAFVSFVPISLGLHRPNEPLIIEIRNGVEYPTCALDLTPTYAVVSSCISFYLPCVVLVGIYCRLYCYAQKHVRSIRAVTRTNADDLQQQQQQQQQQQYQRNAVNRRNGNGCSTPMGKSKKKKSKRSPHQLAAYHTSDRKAAVTVGVIMGVFLVCWMPFFCVNIVAAFCKTCIGETTFKVLSWLGYSNSVFNPIIYSIFNTEFRKAFKRILLRRQLPKLLCCGTFQNEYYVNSSNDSKFITNYEAKFLHSTTDVEQLSAI
| Type | Start | End | Length |
| CDS |
1649 |
1968 |
320 |
| CDS |
2241 |
2509 |
269 |
| CDS |
3061 |
3309 |
249 |
| CDS |
3781 |
3910 |
130 |
| CDS |
4009 |
4249 |
241 |
| intron |
1969 |
2240 |
272 |
| intron |
2510 |
3060 |
551 |
| intron |
3310 |
3780 |
471 |
| intron |
3911 |
4008 |
98 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_001955458 |
GF18779 [Drosophila ananassae] gb|EDV44019.1| GF18779 [Drosophila ananassae] |
1e-146 |
| InterPro |
IPR017452 |
GPCR, rhodopsin-like superfamily |
|
| InterPro |
IPR000929 |
Dopamine receptor |
|
| InterPro |
IPR000276 |
GPCR, rhodopsin-like, 7TM |
|
| Gene Ontology(BP) |
GO:0007186 |
G-protein coupled receptor signaling pathway |
|
| Gene Ontology(CC) |
GO:0016021 |
integral to membrane |
|
| Gene Ontology(MF) |
GO:0004952 |
dopamine receptor activity |
|
| Pfam |
PF10320.4 |
Serpentine type 7TM GPCR chemoreceptor Srsx |
3.4e-08 |
| Pfam |
PF10328.4 |
Serpentine type 7TM GPCR chemoreceptor Srx |
0.0017 |
| Pfam |
PF13908.1 |
Wnt and FGF inhibitory regulator |
0.0098 |
| Pfam |
PF00001.16 |
7 transmembrane receptor (rhodopsin family) |
2e-73 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
| Gene ID |
| Pn.08335 |
| Pn.04900 |
Orthologous genes
| Species |
Gene ID |
| P. vanderplanki |
Pv.02117 |
| M. musculus |
ENSMUSG00000021478 |
| B. mori |
BGIBMGA002277-TA |
| D. plexippus |
DPOGS202585PA |
| N. vitripennis |
NV10767-PA |
| H. sapiens |
ENSP00000327652 |
| H. melpomene |
HMEL003917-PA |
| A. aegypti |
AAEL003920 |
| C. quinquefasciatus |
CPIJ000649 |
| M. musculus |
ENSMUSG00000039358 |
| A. gambiae |
AGAP004613 |
| B. mori |
BGIBMGA002275-TA |
| D. melanogaster |
FBgn0011582 |
| P. humanus |
PHUM434420-PA |
| H. sapiens |
ENSP00000377353 |
| T. castaneum |
TC012447 |
| B. mori |
BGIBMGA002276-TA |
| H. sapiens |
ENSP00000306129 |
| P. vanderplanki |
Pv.17527 |
| C. quinquefasciatus |
CPIJ000647 |
| S. invicta |
SI2.2.0_02156 |