MidgeBase gene description page [Pn.13398]
Outline
| Gene ID | Pn.13398 |
| Type | Protein coding gene |
| Scaffold | PnScaf19432 |
| Start | 29607 |
| End | 29948 |
| Direction | + |
Sequence
Transcript: 273 (bp)
ATGTCTGATCCAAAAAATCCCGAGGAGCTCAAAGTTAAGCATCTAAATCGGAAATTAAAGCAGACGGAGATTGATTTTATGAAATTGATCGAAGAACAGAACGTGCAACGAGTATTGAAATTGAAAAAGACGAGAAAGAACAATATATTGACAGGAATTGCTCTCGGCATTTCTGTTCTTGGCATTTACGGCTACTCCATGTACGCAGTGAAACAGGAAAAGTTCTTGGACGACTTTGAGGAGCCTGCAAAAGAGGAGCTTTCACAGCCACAA
Protein: 91 (aa)
MSDPKNPEELKVKHLNRKLKQTEIDFMKLIEEQNVQRVLKLKKTRKNNILTGIALGISVLGIYGYSMYAVKQEKFLDDFEEPAKEELSQPQ
| Type | Start | End | Length |
| CDS |
29607 |
29760 |
154 |
| CDS |
29827 |
29945 |
119 |
| intron |
29761 |
29826 |
66 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_001660204 |
hypothetical protein AaeL_AAEL009526 [Aedes aegypti] gb|EAT38597.1| conserved hypothetical protein [Aedes aegypti] |
1e-21 |
| InterPro |
IPR018628 |
Coiled-coil domain-containing protein 56 |
|
| Pfam |
PF02667.9 |
Short chain fatty acid transporter |
0.14 |
| Pfam |
PF09813.4 |
Coiled-coil domain-containing protein 56 |
2.1e-28 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| C. quinquefasciatus |
CPIJ007894 |
| H. sapiens |
ENSP00000354762 |
| M. musculus |
ENSMUSG00000017188 |
| A. aegypti |
AAEL009526 |
| D. melanogaster |
FBgn0261353 |