MidgeBase gene description page [Pn.13384]
Outline
| Gene ID | Pn.13384 |
| Type | Protein coding gene |
| Scaffold | PnScaf19406 |
| Start | 19069 |
| End | 22492 |
| Direction | + |
Sequence
Transcript: 1758 (bp)
ATGGATTCATCGGGTATATCACGAAAGCGCATTTTCATCGCGCTGTTCATATCGATTGTGGTCGTCGTCGCAGTAATCACTGGATATCAATTTGGATTTAAGAGCGACACAGATGCCGTTCATGCTGAGCCGATTCGACGCTTTGGTCGTTTCGAGCACGGCGCCGTCGCCGCCAACGGAAAGGAATGTGCTGAGATGGGCGCTGCGATTCTAAGAAGACACGGATCGGTTGCTGACGCGGCAATCACTACAATGCTCTGCGAGGGAATCACATGCCCTCAGTCGACGGGTCTGGGCGGTGGTTTTCACATGACGATCTACATCAAGAGCAAGAACATCGTCGAGTGCCTCGATGCTCGCGAAGTTGCGCCGAAGAAGTCGCACGAGCAGATGTTTGTGAACGACACGAAGAAGTCATCGCTCGAAGGCGGGCTGTCGATTGCCGTTCCGGGCGAGCTAAAGGGCATGTGGGAGCTGCATCAAAAGTACGGAAGCTTGCCGTGGAAGGCGCTCTTCCAGCCGGTCATTGACTTGTGCAAGAACGGTCACGAGGTGACGGAATATCTCGCTCGTGTTTTGAACAGAAAAGCCAGCGCAATCAAGGAAATTCCGTCGCTCCGAGAAGTCTTTGTGAATCCCGAGACGGGCGAGTTGTGGCGTGCCGGCGAGAAAATCAAGCGACTTGCGCTGGCGAAAACATTGGAGATCATCGCGAACGAAGGTGCTGAAACGCTGTACGGAAAGAACGGAACAATCGGCCGGCAAATATTGGAGGATGTGAAGGAGTTCGGTGGTATTTTGACCGAGGAAGACTTGCTGGACTACAAGGTGAAGTGGCTTCAGCCGGACGAGACGACGCTGAAGAATGGCGAGCGTCTCTACTCGATGCCTTTGAGCGGTTCTGGTTCCATTCTCATCTTCATCATGAACCTGCTCAAGGAGTACGACTTGAAGCGCGACGCTTTGTCGTTCCATCGCATCATGGAGGCCTACAAATTAGCATACGCGCGCCGCTCGGAGCTCGCCGATCCGGAATTTGTCGAGAGCGCGCAAGCTCTGGTGAAGAACTTGACGAACGTGGAGTATGCAAATGCGATCCGAAAGAAGATTGACGACACGAAGACACACAACGACATCGACTACTATGGAGGTCACTTTTCCGCGCAGGAGGATCACGGAACTGCTCACATATCGATTTTAGCGCCAAACGGCGATGCAATTTCCGTGACGGGCACCGTTAACTACATTCTCGGCTCGCTGCGACGCTCGAAAACCGGAATTATTCTCAACGACGAAATGGACGATTTCTCGACGCCCGGCCAGAAAAATGTCTACGGCATTCCGCCATCCGAGGCGAACTTCATCAGACCCGGCAAGCGACCAATGTCCTCGATGGCGCCCTCAATCGTCGTCAACGCGGACGGCTCTGTTGGTCTGGTGATTGGCAGTGCGGGCGGGTCGCGAATCACCACTGCAATTGCGCACACCATAATCAACTTTTACTTCTTCAAGACCACCGAGTCGCTGGCGGAGGTTTTTGCGCAGAAGCGTCTTCATCACCAGCTCTTGCCGAATCACATTTCGTTCGAGGATGGCTTCGAAGAGCTCATCATCGGTCAGCTGAGAGATATCTACAATCACACTGTCGATAGAGTGACGGAGACGATTGGTTTCGGTGCGCTTGTCGGCGTCTACGCTAAGGACGGCACCGTTCAGAGCGCATACGATCCGAGACGCGGCGGCAGCGCTGTGGTCATC
Protein: 586 (aa)
MDSSGISRKRIFIALFISIVVVVAVITGYQFGFKSDTDAVHAEPIRRFGRFEHGAVAANGKECAEMGAAILRRHGSVADAAITTMLCEGITCPQSTGLGGGFHMTIYIKSKNIVECLDAREVAPKKSHEQMFVNDTKKSSLEGGLSIAVPGELKGMWELHQKYGSLPWKALFQPVIDLCKNGHEVTEYLARVLNRKASAIKEIPSLREVFVNPETGELWRAGEKIKRLALAKTLEIIANEGAETLYGKNGTIGRQILEDVKEFGGILTEEDLLDYKVKWLQPDETTLKNGERLYSMPLSGSGSILIFIMNLLKEYDLKRDALSFHRIMEAYKLAYARRSELADPEFVESAQALVKNLTNVEYANAIRKKIDDTKTHNDIDYYGGHFSAQEDHGTAHISILAPNGDAISVTGTVNYILGSLRRSKTGIILNDEMDDFSTPGQKNVYGIPPSEANFIRPGKRPMSSMAPSIVVNADGSVGLVIGSAGGSRITTAIAHTIINFYFFKTTESLAEVFAQKRLHHQLLPNHISFEDGFEELIIGQLRDIYNHTVDRVTETIGFGALVGVYAKDGTVQSAYDPRRGGSAVVI
| Type | Start | End | Length |
| CDS |
19069 |
19076 |
8 |
| CDS |
20635 |
20900 |
266 |
| CDS |
21006 |
22489 |
1484 |
| intron |
19077 |
20634 |
1558 |
| intron |
20901 |
21005 |
105 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_001844773 |
gamma-glutamyltranspeptidase 1 [Culex quinquefasciatus] gb|EDS38233.1| gamma-glutamyltranspeptidase 1 [Culex quinquefasciatus] |
1e-165 |
| InterPro |
IPR000101 |
Gamma-glutamyltranspeptidase |
|
| Gene Ontology(MF) |
GO:0003840 |
gamma-glutamyltransferase activity |
|
| Pfam |
PF01019.16 |
Gamma-glutamyltranspeptidase |
3.8e-153 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| A. gambiae |
AGAP010241 |
| H. sapiens |
ENSP00000385016 |
| H. sapiens |
ENSP00000381340 |
| C. quinquefasciatus |
CPIJ016229 |
| H. sapiens |
ENSP00000330080 |
| H. melpomene |
HMEL007389-PA |
| A. aegypti |
AAEL011824 |
| A. mellifera |
GB18219-PA |
| H. sapiens |
ENSP00000383231 |
| D. melanogaster |
FBgn0030796 |
| H. sapiens |
ENSP00000392146 |
| T. castaneum |
TC005911 |
| C. quinquefasciatus |
CPIJ003186 |
| S. invicta |
SI2.2.0_08375 |
| H. sapiens |
ENSP00000384516 |
| M. musculus |
ENSMUSG00000006344 |
| A. aegypti |
AAEL015561 |
| D. melanogaster |
FBgn0025837 |
| A. gambiae |
AGAP008915 |
| H. sapiens |
ENSP00000384820 |
| D. melanogaster |
FBgn0030361 |
| H. sapiens |
ENSP00000419751 |
| H. sapiens |
ENSP00000387499 |
| T. castaneum |
TC006284 |
| H. sapiens |
ENSP00000385975 |
| H. sapiens |
ENSP00000286890 |
| H. sapiens |
ENSP00000384381 |
| D. plexippus |
DPOGS206443PA |
| C. quinquefasciatus |
CPIJ802450 |
| P. vanderplanki |
Pv.13172 |
| M. musculus |
ENSMUSG00000006345 |
| D. melanogaster |
FBgn0030932 |
| H. sapiens |
ENSP00000337587 |
| C. quinquefasciatus |
CPIJ802449 |
| S. invicta |
SI2.2.0_04212 |
| H. sapiens |
ENSP00000385001 |
| T. castaneum |
TC006611 |
| H. sapiens |
ENSP00000393537 |
| H. sapiens |
ENSP00000278765 |
| P. vanderplanki |
Pv.08404 |
| H. sapiens |
ENSP00000385721 |
| H. sapiens |
ENSP00000402035 |
| A. mellifera |
GB20121-PA |
| A. aegypti |
AAEL015391 |
| H. sapiens |
ENSP00000415676 |
| A. aegypti |
AAEL010935 |
| H. sapiens |
ENSP00000415635 |
| H. sapiens |
ENSP00000385601 |
| B. mori |
BGIBMGA005300-TA |
| A. gambiae |
AGAP000853 |
| P. humanus |
PHUM274840-PA |
| A. aegypti |
AAEL004240 |
| B. mori |
BGIBMGA005447-TA |
| C. quinquefasciatus |
CPIJ003185 |
| A. aegypti |
AAEL011823 |
| N. vitripennis |
NV17856-PA |
| N. vitripennis |
NV13150-PA |
| A. aegypti |
AAEL010936 |
| H. sapiens |
ENSP00000395271 |
| H. sapiens |
ENSP00000263112 |
| A. aegypti |
AAEL011822 |
| H. sapiens |
ENSP00000383232 |
| P. vanderplanki |
Pv.08526 |
| H. sapiens |
ENSP00000248923 |
| D. plexippus |
DPOGS207739PA |
| H. sapiens |
ENSP00000383233 |
| H. sapiens |
ENSP00000385445 |