MidgeBase gene description page [Pn.13377]
Outline
| Gene ID | Pn.13377 |
| Type | Protein coding gene |
| Scaffold | PnScaf19399 |
| Start | 15062 |
| End | 18321 |
| Direction | + |
Sequence
Transcript: 540 (bp)
ATGTCAGCCTCACTGGCAACAAACGCTGGAAATTTTCCAGACGAAACCGAAACAGAACAAGTTACTGACATATTGAGTCCAATTGAAGAATATCGCAAGCTGGAATTAAATCCGCCATCGCCTTACAGATCGAATTCGAGCGGTTCTAGTGTAAATTCGCCAAGTGCATTAGGAAGTAGTGGTAACACAAATAATATGGCAAATCCGTATGCAATGGGCCCACTCTATCACAGTCCGGGCGTTCAAAGCTATTGCACGCCAACGGAAAACCTCTCACTTGCCGGACACTACACAGACATGCGGAGCTCAGCCAGTTGGTACGGCTCGACTGCCAACGATCCGCGCTTTGCCACTGGCTGGTTGGTTGGTTTGTTCGTGAAGAAAAGCGAGAAGATATTCATCTATCTATCTACTCAAGCCACACTCGAGTGCTCGAGGGCGTGTGACGAACAGAAAGGAAGCACGAAGATAAGTGCGACGAGTGTGAATGGGGTTGATTTTCAATACAATAATAACAAGCCACTCGAGCCGATGTTACTG
Protein: 180 (aa)
MSASLATNAGNFPDETETEQVTDILSPIEEYRKLELNPPSPYRSNSSGSSVNSPSALGSSGNTNNMANPYAMGPLYHSPGVQSYCTPTENLSLAGHYTDMRSSASWYGSTANDPRFATGWLVGLFVKKSEKIFIYLSTQATLECSRACDEQKGSTKISATSVNGVDFQYNNNKPLEPMLL
| Type | Start | End | Length |
| CDS |
15062 |
15122 |
61 |
| CDS |
15258 |
15324 |
67 |
| CDS |
15431 |
15654 |
224 |
| CDS |
18131 |
18318 |
188 |
| intron |
15123 |
15257 |
135 |
| intron |
15325 |
15430 |
106 |
| intron |
15655 |
18130 |
2476 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
EFR23492 |
hypothetical protein AND_12779 [Anopheles darlingi] |
1e-36 |
| Pfam |
PF10606.4 |
Homer-binding domain of metabotropic glutamate receptor |
0.67 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| B. mori |
BGIBMGA000761-TA |
| A. mellifera |
GB16784-PA |
| S. invicta |
SI2.2.0_00230 |
| M. musculus |
ENSMUSG00000054160 |
| H. sapiens |
ENSP00000429519 |
| A. aegypti |
AAEL003794 |
| B. mori |
BGIBMGA000762-TA |
| H. sapiens |
ENSP00000429607 |
| H. melpomene |
HMEL008187-PA |
| T. castaneum |
TC008996 |
| H. sapiens |
ENSP00000345147 |
| N. vitripennis |
NV18395-PA |
| C. quinquefasciatus |
CPIJ015118 |
| H. sapiens |
ENSP00000428341 |
| M. musculus |
ENSMUSG00000001496 |
| P. vanderplanki |
Pv.13030 |
| T. castaneum |
TC030597-GA |
| S. invicta |
SI2.2.0_08240 |
| D. melanogaster |
FBgn0028993 |
| A. gambiae |
AGAP013315 |
| P. humanus |
PHUM235910-PA |
| H. sapiens |
ENSP00000346879 |
| D. plexippus |
DPOGS212817PA |