MidgeBase gene description page [Pn.13294]
Outline
| Gene ID | Pn.13294 |
| Type | Protein coding gene |
| Scaffold | PnScaf19007 |
| Start | 58863 |
| End | 60790 |
| Direction | + |
Sequence
Transcript: 1482 (bp)
ATGTTCATTGCATTTCTGTCTTTTGTGCTAATGGTTCTGTGGCTGCTTCGCAGCGAGCTGCGTAAAGTGCAGCTGATGTGGAATGTTCGCGGTCCTTCCGCACTGCCGCTCATCGGAAACGGGCTGGATCTCATCAACAAGTCGCCGATCGAATTCATCGACGTGGTCAAGGCCTGGATAAAAGAAAATGGCAGTTTCTTTCGCATTTGGCTCGGCAATCAGCTGCTCATCGTGGTGCTCGAGCCGAAAGTTGTGCAGACCGTCATGACGGACATAAAGCTGATCACGAAAGCACAAGAATACCGATATCTGGAGCCGTGGCTCGGAACGGGCCTGCTTACGTCCACGAACCAAAAGTGGATGACGCGACGCAAAATTCTCACGCCCGCCTTCCACTTTAAAATTCTCGACGAGTTCATCGACGTGTTCGACAAGCAGGGATCGATTTTGATTGAGAAACTCACGAGGCACGCGGGCAAGGAACCGTTTAACGTGTTTCCACTTGTTGCGCTCTGCGCCTTGGATGTCATTTGCGAGACTGCCATGGGGATCACGCTCGATTCGCAATCCGACAGCGAGTCGCAATACGTGAAAAATGTTAATGAGCTCGCGTATTTGATTCATCGGCGCTCTTACGATTTCGTCGCACGCTACGACTTTCTGTACAAATTTACCAAAAACTACAGACGACAAGCGGAGCTCGTTGCCGCTCTCCACGATTTCACCGAGTCGGTCATTAACGCGCGCCGCAAGGAAATGAAAAGCGGAAAAAACGCGACAAACGACGACGAAGATTTCGGCATCAAAAAGAAGAAGGCGCTGCTCGATCTTCTCCTCGAGACGACGGTCGAAGGCAAGCCGCTGAGCAACGAGGATATCCGAGAAGAAATTGACACTTTCATGTTTGAAGGTCACGATACGACTAGCAGCGCCCTCGCATACACACTCTACAATATCGCAAAGCATGAGCACGTACAGAGAAAATGCTACGAGGAAATACAAAGCGTGTTAGGAAGAGACGGCAAAGTCACTATGAAGTCACTCAATGATCTGAAGTACTTGGAACTTGTATGCAAAGAATCGCTGCGGTTGTATCCGTCCGTGCCGATGTTTGGCCGCAAAGTTCCCGAGGAAATGATGATCGACGGCAAGCTCATACCGAAGGACACAACAATTTTACTGCTGCCCTACTTCATGGCGCGCGATAAGACGAACTGGGAAAATCCTGAAGAATTCATACCGGAAAGGCACGCAGTCGAAAAGGACAACGAAGAGTCGCAAGTGTTTTCGTACATTCCGTTCTCTGGCGGCTACAGGAACTGCATCGGTCAGAAATTTGCAATGCTAGAAATCAAGTCGACAATCGCAAAGGTTGTGCTCAACTACACACTGAAAGTACAAGACAACTACACTGCTCAAGACTCGCTCGAGCTTGTGATAAAGAGCGCAAACGGCATCATGTTGAGCATCGACAAAAGAGAT
Protein: 494 (aa)
MFIAFLSFVLMVLWLLRSELRKVQLMWNVRGPSALPLIGNGLDLINKSPIEFIDVVKAWIKENGSFFRIWLGNQLLIVVLEPKVVQTVMTDIKLITKAQEYRYLEPWLGTGLLTSTNQKWMTRRKILTPAFHFKILDEFIDVFDKQGSILIEKLTRHAGKEPFNVFPLVALCALDVICETAMGITLDSQSDSESQYVKNVNELAYLIHRRSYDFVARYDFLYKFTKNYRRQAELVAALHDFTESVINARRKEMKSGKNATNDDEDFGIKKKKALLDLLLETTVEGKPLSNEDIREEIDTFMFEGHDTTSSALAYTLYNIAKHEHVQRKCYEEIQSVLGRDGKVTMKSLNDLKYLELVCKESLRLYPSVPMFGRKVPEEMMIDGKLIPKDTTILLLPYFMARDKTNWENPEEFIPERHAVEKDNEESQVFSYIPFSGGYRNCIGQKFAMLEIKSTIAKVVLNYTLKVQDNYTAQDSLELVIKSANGIMLSIDKRD
| Type | Start | End | Length |
| CDS |
58863 |
59397 |
535 |
| CDS |
59463 |
59532 |
70 |
| CDS |
59618 |
59921 |
304 |
| CDS |
59992 |
60119 |
128 |
| CDS |
60198 |
60304 |
107 |
| CDS |
60450 |
60787 |
338 |
| intron |
59398 |
59462 |
65 |
| intron |
59533 |
59617 |
85 |
| intron |
59922 |
59991 |
70 |
| intron |
60120 |
60197 |
78 |
| intron |
60305 |
60449 |
145 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_001237476 |
AGAP002418-PA [Anopheles gambiae str. PEST] gb|EAU77127.3| AGAP002418-PA [Anopheles gambiae str. PEST] |
1e-133 |
| InterPro |
IPR001128 |
Cytochrome P450 |
|
| InterPro |
IPR002401 |
Cytochrome P450, E-class, group I |
|
| InterPro |
IPR017972 |
Cytochrome P450, conserved site |
|
| Gene Ontology(BP) |
GO:0055114 |
oxidation-reduction process |
|
| Gene Ontology(MF) |
GO:0009055 |
electron carrier activity |
|
| Gene Ontology(MF) |
GO:0020037 |
heme binding |
|
| Gene Ontology(MF) |
GO:0016705 |
oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen |
|
| Gene Ontology(MF) |
GO:0005506 |
iron ion binding |
|
| Pfam |
PF00067.17 |
Cytochrome P450 |
2e-110 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| P. vanderplanki |
Pv.04458 |