MidgeBase gene description page [Pn.13274]
Outline
| Gene ID | Pn.13274 |
| Type | Protein coding gene |
| Scaffold | PnScaf18977 |
| Start | 11903 |
| End | 15934 |
| Direction | - |
Sequence
Transcript: 1833 (bp)
ATGCCTCGAGTGACCGGCAAGCTCGCCAGTTCAAGTTGTGACTCAAACGTGAAAAGAATGATGAAATTTTCAATTCGCTTATTTCTAATACTAATTTTTGTCGCCCATTACGCGAAAGCCCGAACATCCGACAGCCTCAGAGTGCGTATCGACGATGGCCGGTTGATAGGAAAATGGATGACCTCGATTTCGGGCCGAAACATTCGTGCATTTACCAGAATCCCCTATGCCGCTCCACCGGTCGGTGATTTGAGATTTCGGCCACCGCAAAAGGCGATTCCGTGGGGAAAGCGGACGCTTTTGGCACAAACCGAGCCGCCAGTGTGTACGCAGACCAACATCTTCATTGACGCTGGAAGCAGGAAAGTTTTCGGGCAAGAAGATTGTCTGTATGTTAACGTCTACACACCTGAGATAAGAAATGACACAAACGTATCGAAGAAATGGCCCGTCATGGTGTGGCTGCACGGAAGCGAATGGGTTGAAGGACATGGCGGCTACACTCTCTACGGACCAGAATATCTTCTCGAGCACGATGTCGTGCTTGTGACAGGAAATTATCGGTTGGGCCCGCTGGGCTTTCTCTCGACCGAGGACGAGAATGCATCCGGCAATTTCGGCTTTAAGGATCAGCTGCTCATGCTCGAATGGGTGCAGATGAATATCGAGAAGTTCGGCGGCGATCCCAATTCGGTCACGATTTTCGGCGAGAGTACGGGCGGAGCAGCTGTTAATTATCACATGTTCTCCTCAATGTCCCGTGGCCTGTTTCATCGGGCGATTTCTCAATCCGGCACGCTGATGAACGGCTGGTCCGATCCGATGCCGAAGGGACTGGCGAAAATGAGAGCAATTAGGATGGCAGATAAAATGAATTGCCCAATATCCGGCACGTCGATGAAGAACATGGTCGAGTGCTTGCGGAAGGTGCCGGCCGAGAACCTCACCATCGCTATCCATGACTTTTTCGAGTGGGGCACCGACCCCGTACTTACCTTTCAACCGGTCATTGAGACATCCGAGCTGGAGGAGGAGCCGTTCATCATGGACTTGCGGTACAAAAAGTTTTCGCTCGACATTCCGTGGCTGGTTGGGATGACGAGCGACGAGGGACTCCTGAAGAGTGCAACAATTTTTAATAGCATCCAAAAGACGCAAGAGTTGATAAAGGAGTGGGAGAGAGTCTTACCGATAACCTTCTATTATGATCGCTTGTTCGAGGACGACGTACTGGAGCTGAACGTGAAAATCTACGATTTCTACTTCAAAAATGAGTTCCTTGGCGACAGCAAGGGAAACCTTACCAATATGTACACAGACGGATTCTTCCTTTCCGGAATGGTCGATAGCCTAGCATACCGCCTACGCGACAATAATCGAGATAATACCTTTGTGTATTTGTTCACCCACAAGGGAGCAGCGAGCTTCTCGGAAGTCTTTAATGGTGGCAGGGAAAAGTTTCACGGAACATGCCATGCTGATGATTTATTATACTTGTTTCCATGGCAGAAAAATGTCCCAGATCTCTATAATTCCGTGCCGACTGAGGAGGATAGAAAATTGATAAAGCTTATGACAAAGCTGTGGGTTAATTTCGCTACCACCGGAACACCTACGCCCGAATGGAGCAAGGACTCAGAATTTCCATTCTGGACGCCAGCATCTAAATTTCCACTCGATTACATGCAAATTGGAAACGAGAATGGCCTCTCCGATAAATTATTGCAGATGAAGAAGGATTTGTATCCAGAGCGAGCCCAGTTTTGGACAGAATTGAGGAAAAAAACCTTCATGCACAACTGGAAGCTCGACACGAGCGATAAAGATGAATTA
Protein: 611 (aa)
MPRVTGKLASSSCDSNVKRMMKFSIRLFLILIFVAHYAKARTSDSLRVRIDDGRLIGKWMTSISGRNIRAFTRIPYAAPPVGDLRFRPPQKAIPWGKRTLLAQTEPPVCTQTNIFIDAGSRKVFGQEDCLYVNVYTPEIRNDTNVSKKWPVMVWLHGSEWVEGHGGYTLYGPEYLLEHDVVLVTGNYRLGPLGFLSTEDENASGNFGFKDQLLMLEWVQMNIEKFGGDPNSVTIFGESTGGAAVNYHMFSSMSRGLFHRAISQSGTLMNGWSDPMPKGLAKMRAIRMADKMNCPISGTSMKNMVECLRKVPAENLTIAIHDFFEWGTDPVLTFQPVIETSELEEEPFIMDLRYKKFSLDIPWLVGMTSDEGLLKSATIFNSIQKTQELIKEWERVLPITFYYDRLFEDDVLELNVKIYDFYFKNEFLGDSKGNLTNMYTDGFFLSGMVDSLAYRLRDNNRDNTFVYLFTHKGAASFSEVFNGGREKFHGTCHADDLLYLFPWQKNVPDLYNSVPTEEDRKLIKLMTKLWVNFATTGTPTPEWSKDSEFPFWTPASKFPLDYMQIGNENGLSDKLLQMKKDLYPERAQFWTELRKKTFMHNWKLDTSDKDEL
| Type | Start | End | Length |
| CDS |
11906 |
12131 |
226 |
| CDS |
12426 |
12724 |
299 |
| CDS |
12794 |
12972 |
179 |
| CDS |
13205 |
13364 |
160 |
| CDS |
13420 |
13670 |
251 |
| CDS |
13738 |
13981 |
244 |
| CDS |
14047 |
14106 |
60 |
| CDS |
14168 |
14568 |
401 |
| CDS |
15922 |
15934 |
13 |
| intron |
12132 |
12425 |
294 |
| intron |
12725 |
12793 |
69 |
| intron |
12973 |
13204 |
232 |
| intron |
13365 |
13419 |
55 |
| intron |
13671 |
13737 |
67 |
| intron |
13982 |
14046 |
65 |
| intron |
14107 |
14167 |
61 |
| intron |
14569 |
15921 |
1353 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_322067 |
AGAP001101-PA [Anopheles gambiae str. PEST] gb|EAA01215.4| AGAP001101-PA [Anopheles gambiae str. PEST] |
1e-139 |
| InterPro |
IPR019819 |
Carboxylesterase type B, conserved site |
|
| InterPro |
IPR019826 |
Carboxylesterase type B, active site |
|
| InterPro |
IPR002018 |
Carboxylesterase, type B |
|
| Pfam |
PF07859.8 |
alpha/beta hydrolase fold |
0.0053 |
| Pfam |
PF00135.23 |
Carboxylesterase family |
8.4e-132 |
| Pfam |
PF00326.16 |
Prolyl oligopeptidase family |
0.004 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
| Gene ID |
| Pn.13273 |
| Pn.00132 |
Orthologous genes
| Species |
Gene ID |
| D. plexippus |
DPOGS209671PA |
| S. invicta |
SI2.2.0_14736 |
| M. musculus |
ENSMUSG00000062826 |
| B. mori |
BGIBMGA012585-TA |
| C. quinquefasciatus |
CPIJ007424 |
| P. vanderplanki |
Pv.08213 |
| A. gambiae |
AGAP001101 |
| M. musculus |
ENSMUSG00000031884 |
| M. musculus |
ENSMUSG00000031877 |
| P. vanderplanki |
Pv.04985 |
| A. mellifera |
GB11403-PA |
| M. musculus |
ENSMUSG00000091813 |
| M. musculus |
ENSMUSG00000061825 |
| T. castaneum |
TC014795 |
| P. humanus |
PHUM499800-PA |
| P. vanderplanki |
Pv.07552 |
| P. vanderplanki |
Pv.08214 |
| M. musculus |
ENSMUSG00000055730 |
| N. vitripennis |
NV17362-PA |
| A. aegypti |
AAEL012886 |
| H. melpomene |
HMEL002163-PA |
| D. melanogaster |
FBgn0029690 |
| M. musculus |
ENSMUSG00000031886 |