MidgeBase gene description page [Pn.13273]
Outline
| Gene ID | Pn.13273 |
| Type | Protein coding gene |
| Scaffold | PnScaf18977 |
| Start | 9255 |
| End | 11477 |
| Direction | - |
Sequence
Transcript: 1713 (bp)
ATGGCCGCCTTAAAATTTCTTATTATTGCAATTGTCTTGCAATTTTGCGCTGGTTTCGAAGACCCAAGCGAAATGCTCGTCGAGTTAAACGATGGTAAAATTCTCGGACGTGCCATGGTGTCTAATTCCGGCCGCACAATTAGAGCCTTCACCGGAATCCCGTACGCAGCGCCGCCGGTCGGAAACCTTAGATTTCGACCGCCGCAAAAGGTTACGCCTTGGAGCGGGACGCTCGTCGCTCAGAAAAATCCACCGCTGTGCATGCAATTCAATCCATTTATACGGTCGTCCGTGATTGAGGGTCAAGAGGACTGTCTTTACATAAACGTATTTACGCCGGAAATGGGCGACGAGAAGAGAAAGCTGCCGGTTATCGTGTGGGTCCACGGAGGCGGATGGACGAGAGGAGAAGCTTATCCGTACGGCCCCGAGTATCTTCTCGATCACGACATCATTCTCGTCAGTGGGCACTATCGAGTCGGAGCATTGGGATTTCTTTCGAGCGAAGACGAGCATGTGTCTGGCAATTACGGATTTAAGGATCAAGCCTACATGCTCAAGTGGGTGCACGATAACATTGATAAATTCGGCGGCGATAAAGACTCTGTCACAATCTGGGGAGAGTCAGCGGGCGGAGCATCCGTCCACTATCTCATGTACTCGCCGATGTCCCGTGGCCTCTTCCACCGTGCAATTGCACACAGCGGGAGCATGTACAATAGCTGGTCAGATCCGACTCGTCCTGGCGTGGCACGTAGCAATTTCTTCAAATTTGCCATCGAAGTCCGATGTGCAACGTCAGAGAACGACGAAAATATGGAGCAAATTGCATCTTGCATGAGGAGCATCGAAGCGGAAAAATTGACCGAGGTCTTGACGAGAAGTTACTTTTGGGATTACGATCCGGTCGTGCCACTGCAACCCGTTATCGAATCATGGCAAATGGACGAAGAACCGTTCATTGCGGAACGTGCCTTTGCAAATTTCTCCACTGAAATTCCGTGGCTAATTGGAATGAACAGCGACGAGGGACTGCTGAAAGTCGGAGCAATGTTCTACGATAACGCCTTTCTTAATGAGCTCTTGAGCAAGTGGAACGAAGTCTTGCCGCACTCATTTTATTACAACCACTTGGAGGGCACTCAGCAGGCCGAGATTACGAAGAAATTGAATGAGTTTTACTTCGGTAACGAGACGCTATCGTCTGAGACGATGAGTGACCGACGCGGCTTGATTGACATGTGGACTGACGGATGGTTTATTGGCATGTTCGAGAGCCTCAAATATCGCTTCGAGAACGGCGGTCGAGACAACACTTTTATCTATCATTTCACCCACAAGTCGACGGCGAGTTTCTCGCAGACACGAGAATTTCTCGGCACATGTCACGTTGACGACTTAATTCCGGTATTTTCGCTGCGCAAGACTTACTTCTACAGCTCCATTCCGACGAGACACGACCGGGAGTTGTCGGAAAAAATGACAAAAATGTGGATTAATTTCGCCTCGACTGGAAATCCGACTCCGGCAAATACTGTCGGCGTTCCTCAGTGGCCGAGTGCAGCTAGTGTGGAGTCCTTCAAGTACATGCAAATTGGCAACGAAAACGGCAACAGCGAGAGCCTCTTTCAAGTGAAAGAGAACTATTATGCGGAGCGAGCTGACTTTTGGATGAGTCTGAGAGAGCAATTCGGTCTCAACTCCTGGAAAGAT
Protein: 571 (aa)
MAALKFLIIAIVLQFCAGFEDPSEMLVELNDGKILGRAMVSNSGRTIRAFTGIPYAAPPVGNLRFRPPQKVTPWSGTLVAQKNPPLCMQFNPFIRSSVIEGQEDCLYINVFTPEMGDEKRKLPVIVWVHGGGWTRGEAYPYGPEYLLDHDIILVSGHYRVGALGFLSSEDEHVSGNYGFKDQAYMLKWVHDNIDKFGGDKDSVTIWGESAGGASVHYLMYSPMSRGLFHRAIAHSGSMYNSWSDPTRPGVARSNFFKFAIEVRCATSENDENMEQIASCMRSIEAEKLTEVLTRSYFWDYDPVVPLQPVIESWQMDEEPFIAERAFANFSTEIPWLIGMNSDEGLLKVGAMFYDNAFLNELLSKWNEVLPHSFYYNHLEGTQQAEITKKLNEFYFGNETLSSETMSDRRGLIDMWTDGWFIGMFESLKYRFENGGRDNTFIYHFTHKSTASFSQTREFLGTCHVDDLIPVFSLRKTYFYSSIPTRHDRELSEKMTKMWINFASTGNPTPANTVGVPQWPSAASVESFKYMQIGNENGNSESLFQVKENYYAERADFWMSLREQFGLNSWKD
| Type | Start | End | Length |
| CDS |
9258 |
9259 |
2 |
| CDS |
9367 |
9563 |
197 |
| CDS |
9644 |
10109 |
466 |
| CDS |
10204 |
10629 |
426 |
| CDS |
10856 |
11477 |
622 |
| intron |
9260 |
9366 |
107 |
| intron |
9564 |
9643 |
80 |
| intron |
10110 |
10203 |
94 |
| intron |
10630 |
10855 |
226 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_001976837 |
GG18565 [Drosophila erecta] gb|EDV45764.1| GG18565 [Drosophila erecta] |
1e-120 |
| InterPro |
IPR019819 |
Carboxylesterase type B, conserved site |
|
| InterPro |
IPR019826 |
Carboxylesterase type B, active site |
|
| InterPro |
IPR002018 |
Carboxylesterase, type B |
|
| Pfam |
PF07859.8 |
alpha/beta hydrolase fold |
4.8e-05 |
| Pfam |
PF00756.15 |
Putative esterase |
0.0004 |
| Pfam |
PF00135.23 |
Carboxylesterase family |
2.1e-136 |
| Pfam |
PF00326.16 |
Prolyl oligopeptidase family |
8.8e-05 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
| Gene ID |
| Pn.13274 |
| Pn.00132 |
Orthologous genes
| Species |
Gene ID |
| D. plexippus |
DPOGS209671PA |
| S. invicta |
SI2.2.0_14736 |
| M. musculus |
ENSMUSG00000062826 |
| B. mori |
BGIBMGA012585-TA |
| C. quinquefasciatus |
CPIJ007424 |
| P. vanderplanki |
Pv.08213 |
| A. gambiae |
AGAP001101 |
| M. musculus |
ENSMUSG00000031884 |
| M. musculus |
ENSMUSG00000031877 |
| P. vanderplanki |
Pv.04985 |
| A. mellifera |
GB11403-PA |
| M. musculus |
ENSMUSG00000091813 |
| M. musculus |
ENSMUSG00000061825 |
| T. castaneum |
TC014795 |
| P. humanus |
PHUM499800-PA |
| P. vanderplanki |
Pv.07552 |
| P. vanderplanki |
Pv.08214 |
| M. musculus |
ENSMUSG00000055730 |
| N. vitripennis |
NV17362-PA |
| A. aegypti |
AAEL012886 |
| H. melpomene |
HMEL002163-PA |
| D. melanogaster |
FBgn0029690 |
| M. musculus |
ENSMUSG00000031886 |