MidgeBase gene description page [Pn.13253]
Outline
| Gene ID | Pn.13253 |
| Type | Protein coding gene |
| Scaffold | PnScaf18929 |
| Start | 48814 |
| End | 50420 |
| Direction | + |
Sequence
Transcript: 1134 (bp)
ATGACGATAATTGAGGGGAATATCGATGCGAGTGAGCAGTGCGTTGATCTTGCGAGCAAGGAGATTTCAAACGGAAATCTCGAAAAAGCAGAAAAATTGCTGCTGAAAGCTTTAAAATTGTACCCCAAAAATCGCAAAGCAGAATTAATTCTAAATAAATTAAAGGCTGGCAGTTTCGCTAAACCTTCATCGTCTTCGTCGTCGAATGGCAGTTCAGCTGCTGGAAGTGATGGAGTTCACCATAGAAGACGTCCAACAACTGCTCCGAAACCAGAGGAGCCCAAACTGGGCGAAGACTACACTCAAGATCAACTCGATATTGTTCACAAAATAAAAAAGTGCAAAGATTATTACGAGGTTTTGGGATGCAATAAGGAGTCGACGGATTCGGAAATTAAAAAGGCATACAAGAAACTTGCATTGCAGCTTCATCCGGACAAGAACAAAGCGCCAGGCTCAGTTGAGGCTTTCAAAGCCATAGGCAACGCAGTTGCTGTTTTGACAGACGCTGAAAAAAGAAAATCGTATGACTTATATGGTAAAGACGACCAGAATCTTCGAAGATCGGGCAACTTCAACACTTATAGCAGCTTCAGAAATCCTGATTATGCTTATGCGAGAGGATTCGAAAGCGAATTCACTGCTGAAGAGCTTTTCAACATGTTTTTCGGTGGCGGTTTTCCTCAGCAAGCAACTCAAGCTCGCTATAGACGGTATCAGCACCAACACGAGACTCAAACAGGACAATCAAGTCTAGCATTTGGCTTGATTTTTCTTTTTATAATCGTTTCAGTTTTGTCGACCTTTTTCCAATCGGATCCAATGTATAGCTTATCACCTAGTTCAAAATATCCAATTGAACGCAAGACACTCAATCATCGCATTCCCTACTTTGTGAAAGAAAACTTTGCATCAGAATATCAAGGGTCTATGGGTCGATTGGAGAGTGCCGTTGAAGAGGAGTACATCATGAATATGAAGCGAGCGTGCTTTAGTGAAAAGAACTATCGCGAAGCAATGATGTCAAGGGCTCGAAGTTTTGGTAGTAGGTCACAATATGCTCAAGCTCAGGCTTTGAAAACACCATCTTGCGATGCGCTTTATAAGCTCGGAATTTCGGGACGTACTGCATAT
Protein: 378 (aa)
MTIIEGNIDASEQCVDLASKEISNGNLEKAEKLLLKALKLYPKNRKAELILNKLKAGSFAKPSSSSSSNGSSAAGSDGVHHRRRPTTAPKPEEPKLGEDYTQDQLDIVHKIKKCKDYYEVLGCNKESTDSEIKKAYKKLALQLHPDKNKAPGSVEAFKAIGNAVAVLTDAEKRKSYDLYGKDDQNLRRSGNFNTYSSFRNPDYAYARGFESEFTAEELFNMFFGGGFPQQATQARYRRYQHQHETQTGQSSLAFGLIFLFIIVSVLSTFFQSDPMYSLSPSSKYPIERKTLNHRIPYFVKENFASEYQGSMGRLESAVEEEYIMNMKRACFSEKNYREAMMSRARSFGSRSQYAQAQALKTPSCDALYKLGISGRTAY
| Type | Start | End | Length |
| CDS |
48814 |
49151 |
338 |
| CDS |
49268 |
49355 |
88 |
| CDS |
49418 |
49732 |
315 |
| CDS |
49797 |
49900 |
104 |
| CDS |
50002 |
50165 |
164 |
| CDS |
50228 |
50324 |
97 |
| CDS |
50390 |
50417 |
28 |
| intron |
49152 |
49267 |
116 |
| intron |
49356 |
49417 |
62 |
| intron |
49733 |
49796 |
64 |
| intron |
49901 |
50001 |
101 |
| intron |
50166 |
50227 |
62 |
| intron |
50325 |
50389 |
65 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_001849295 |
DNA-J [Culex quinquefasciatus] gb|EDS30003.1| DNA-J [Culex quinquefasciatus] |
1e-116 |
| InterPro |
IPR015399 |
Domain of unknown function DUF1977, DnaJ-like |
|
| InterPro |
IPR011990 |
Tetratricopeptide-like helical |
|
| InterPro |
IPR001623 |
Heat shock protein DnaJ, N-terminal |
|
| InterPro |
IPR003095 |
Heat shock protein DnaJ |
|
| Gene Ontology(BP) |
GO:0006457 |
protein folding |
|
| Gene Ontology(MF) |
GO:0005515 |
protein binding |
|
| Gene Ontology(MF) |
GO:0051082 |
unfolded protein binding |
|
| Gene Ontology(MF) |
GO:0031072 |
heat shock protein binding |
|
| Pfam |
PF07719.12 |
Tetratricopeptide repeat |
0.00023 |
| Pfam |
PF13174.1 |
Tetratricopeptide repeat |
1.7 |
| Pfam |
PF13428.1 |
Tetratricopeptide repeat |
0.0011 |
| Pfam |
PF13432.1 |
Tetratricopeptide repeat |
0.0024 |
| Pfam |
PF00515.23 |
Tetratricopeptide repeat |
0.0027 |
| Pfam |
PF09320.6 |
Domain of unknown function (DUF1977) |
3.8e-31 |
| Pfam |
PF13414.1 |
TPR repeat |
0.0067 |
| Pfam |
PF13181.1 |
Tetratricopeptide repeat |
0.061 |
| Pfam |
PF00226.26 |
DnaJ domain |
1e-23 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| P. vanderplanki |
Pv.05403 |
| D. plexippus |
DPOGS207907PA |
| D. melanogaster |
FBgn0038195 |
| A. aegypti |
AAEL003366 |
| H. sapiens |
ENSP00000404381 |
| H. sapiens |
ENSP00000345575 |
| N. vitripennis |
NV15676-PA |
| S. invicta |
SI2.2.0_01145 |
| M. musculus |
ENSMUSG00000074212 |
| H. sapiens |
ENSP00000378363 |
| A. gambiae |
AGAP001859 |
| A. gambiae |
AGAP001810 |
| A. mellifera |
GB19680-PA |
| C. quinquefasciatus |
CPIJ007189 |
| T. castaneum |
TC003996 |
| H. melpomene |
HMEL010162-PA |
| H. sapiens |
ENSP00000403313 |
| A. aegypti |
AAEL013199 |
| P. humanus |
PHUM285490-PA |
| B. mori |
BGIBMGA014455-TA |
| M. musculus |
ENSMUSG00000020109 |
| C. quinquefasciatus |
CPIJ003571 |