MidgeBase gene description page [Pn.13216]
Outline
| Gene ID | Pn.13216 |
| Type | Protein coding gene |
| Scaffold | PnScaf18847 |
| Start | 24168 |
| End | 35624 |
| Direction | + |
Sequence
Transcript: 6828 (bp)
ATGCATTCGCAGGATACAAATGAAAATGCGAGATATGTGCTACAGGTTTACGTTGGAGCTCTTTCCGTACATTATGAGGCGTTGAGTGTGGAAGCATCAAAGCAAACATCGGCCGAGGAGATTGTCACGTGTATAGCTGAGCGATTAGGACTGACCGGAAATAATTATGAGCTAGCGGAAGTCATTGGAAATTGCAAGGAGCGACGATTATCATCGCACGAGAAGCCCGTATCGCTAAAGCTACTTTGGCCCAAGCATTCAGATCCTAATTTCGGCCGGTTCTATTTGCGTGAAAAGCAAACCAATGAGCCAACATGGTACGGGTTTGATCCTCAAGTGCTAAAAGAATTTCTCTCGCAACCGGAAAATCGTGAATATCCTGACTTGTGCCAATTGCCTAATCTAAATGAAGCCACTCTCCTCGAGAATCTCCGCCAACGTTTCGAAGCCGGGCACATCTATACTTATGTCGGATCTATACTCATTGCCGTCAATCCATTCAGATTTCTACCCATTTATAATCCAAAATATGTGCGACTTTATCAAAATCAACGCATTGGTCTCCTTTTACCGCCTCATATTTTTGCTATCGCCGATAATGCTTACTATTGCATGCTGAAAGAAAAACGTAATCAGTGTGTGGTCATCTCAGGTGAGAGCGGGTCAGGCAAAACAGAAAGCACAAATTTCCTGCTTCATCATCTGACAGCGTTGTCGTCGAAAGGATCGCATGGATCGGGTGTAGAGCAAACAATTTTGAGTGCAGGCCCAGTTCTTGAAGCGTTCGGAAATGCCAAGACAGCACACAACAACAACTCGAGTCGGTTTGGAAAGTTTATACAAGTAAACTATCATGAAAATGGAATGGTTCAAGGAGCTGTTGTTCAAAAGTACCTGCTTGAAAAGAGTAGAATAGTCTCACAAGGAACATATGAGCGAAATTATCACGTTTTTTATTACTTGCTCTCTGGTGCCACTGAAACTGAACGCGAAACACTTCATCTACTTCCAGCCGAAAAATATAATTACCTGAATGCCAAGAATCTTACATTGGAAAATTGTGATGAGAAATACGAGTTTTCGCGACTCAAACAATCCATGGAAATGGTCGGCTTTTCTTCGGAGAAGCAGAGACGTTTATTTATGGTCTTATCAGCAGTATTGCTCTTGGGAAATGTGGAATTTCATCCAAAAAAATCGGCATATCATCACGACGAAAGCGTGAACGTAAAGAATCTCGATGTTGTGCATCTGATATCAGAATTACTTAAAGTCAAGTATGAAACGTTGCTCGCTGCTCTGACATCAAAGCGCGTAAAGGCAAGTGACGAGACGCTCATAATGCAATATAAATTACCAGAAGCAATAGCAGCACGTGACGCTTTAGCAAAGTGTCTCTACGAAACCCTGTTTAACTGGATCGTGATGCAAGTCAATCATGCACTCTTGAGTAAAGATCCAAATGCAGCTCCCATCGGAAACTCAATTGGAGTACTCGACATCTTTGGTTTTGAGGATTTCAATGGTGGCAACTACTTTGAGCAAATCTGCATCAATTACGCGAACGAACATTTGCAGTACTACTTTAACTTGCATGTCTTCAAGTATGAACAGAAAGAGTATAAGCGCGAGGGAATAAAATGGACTGATATTGAGTTTATGGATAATTCTGGATGCTTACACCTCTTTGAATCAAAGCCAACTGGTTTGCTTTGTATTCTAGACGATTCTTGCAATTTTCCCGGTGGCAGCAATGAGAATCTACTTCACAAATTTAATATTATTCACAAAGACAATCCGTTTTACGAGAAACCTCAAAGAAAAGAAAACGCTTTTATAATTAGACACTATGCCGGTAAAGTTAAATATCAGGTTGCTGAAATGCGTGAGAAAAATTTGGATCTTATGAGACAAGATATTGTGAGTGTTCTTAAGAATTCTAGTATGGCGTTTGTACGTGAGCTAGTTGGAGCGGATCCGGTCGCTGTTTTTCGTTGGGCAATTCTGAGAGCCTTTTTCCGAGGCTATTTTGCATTTCGATCAGCAGGCATGAAGCATAGAAAGGAGCGAGCCGATCAATCGTTGAGTAAAATTACAACAAAAGCGCGCTTCAGAACTGGAAATGAAAGTCTGGTTAGTCATCTGGTGACTTTGTCATCTGTTAATTTAGTAATATATCGGATTGCTAAACGAATCAATCCCACAACGACCTTTATGGCGTTGAATGCAAACAACAACGAACCAACAACGAATTTCATTCATCATCGTGTCCATAACAGTCCAATGCATCAGGCAACTACTCCGCCTCGTCGTTCATGGTCAACATTTACTTTTAATAATAAAAATTTCCCGGATGGTAAGCTGAGCTATGAGAGCCAACAGTCAAGTGGCGATCGAAGCTCATGGCGAAACGATGTTAATGAGATTGTGCGATCGCGCGATGGAAGGGAGAGGCAGGATGTTATGGCACGAGCTTCGCAAATCGTTATGAAAAACAAATCATTTAGACCACGAGAGAGACCGAAAAAAGGCTTGAAGAATCTCCAATCAGTGAAGACATTAACTGCTGGTCAAAATTTAATAAATAATCAAACAGCTGTGAAAACTCGAAAGCAGCCACTTACAGTCACTGCACAATTTCAAAATTCATTAATTGCACTCATGGAAACTCTCAATCAGGCGAATCCATTCTTCATTCGATGCATTAAATCGAATTCCAACAAGATTCCTAATCAGTTTGACGATGCGACAGTAACGAGACAGCTGCGTTACACTGGCATGCTTGAAACAGTGAGAATTCGACGCGCCGGTTACAATGTTAGATTAACGTATGAGGAATTCATTCAACACTATCGAATTTTGTTGCCAAAAGGACTGTTGAGTTCGCAAAAGGATGTGCGCGACTTCATGAGTCATCTGATGATCCTAAACAATCAACACTATCAATTAGGAATAACTAAAATTTACATGCGCGAAAGTGAAAAGATGCGATTAGATATAAAGCTACATACGAAGATCATCGAGTCAATCGTTTTCATTCAGCGCTGGTTTCGAGGCATTCTGCAGAGACAAAAGTTTCTGCGACTACGGCAAGCCGCAATTGTTCTGCAATCAAATTTACGTACGACACTTGCACGCAGAAAATTCATTTTTCATCGGGCTTGTTTTCACGGAGCAGCAATTACGATTCAGGCAGCATGGCGTATGTATGTCGAGAGGAAGAAATATTTGCATATTCGCCACACGGTGATACTTTTACAAGCGCATATTAGAGGTAAATTAGCTAGAGCAAAAATTCAACAGAATTTACAGAAGCAGAAGCATATGCGCGAAAGACAAAAACTGAGATCTACACAAAGCTTGCCAGTAAACGAACGAAGTGTAGACGTTCACTTTGAGCAAGTGAAGCGGATTCGGACTCCGACGCCTCACTACAGCTTGGACGCTGACATCTGCTCCGAAGAATCTCCAAGTCACACGAGACTTTCTAAACAAAAACGTGATCAAATGTTGGATCAAACAGAGCAACAAATTAAAGATTTATTATTAATTAATAAAGAAGAGCAATATCAGATCAGGAAGACATCTGTTCCAACAATCGACTCTTATCATTCTCCATATCAAGCATCGCTAGCAACACTTCCATCGTCAACATCAACATCCACCACAACAAGCACCACAAATTACCGTCACGACGACGTTCTAGATTTAGGCTCAAAGGTTTACGATGTCGAGAAAGCAATGCGGAGGAGCGCTACTGAGGACCCGCCAACTGAAGCAGCACTTAAACGATTTGATATTACTAAGATGCCCATTCGTCGCGTCGACTCGGGTCCATCACGACGCGACATTCGTTACGATTCAAAGAATAATGTTCAAATTACACCTCGTCCAACGCCCGCAACTGACGTTGAAATTGTTTTTGTGAATTCTCAACAGTCAACACTGCCATCGACAGATGCCACAACACAGCCGACAAATCTTACTCACTCGCCACCGCCTGCGACTCAAAGTTTACGCTCGAGTCCTTACAACCAGCAATACAGTCTCGAGACTTTACCACAGCGGCGTGACATCATTTGCAGGAGTCTCAATGAGGAATATCAAAATATTCAGCCGCCCATTGTCTATCACAATCAACAGCAGCAACAGCAACAGCAAAATGATAGCACTGCCATTCGATCAACATTCAGTGTACCTCCCAAGGGCAAAGCAGCAGCTCTATTGGGTACAATATCAGAGACGAGTAAGCATGGAAAGAAAGAGATGACAGATATTCTCAGTAAAAATAAACGCACTAAGAATAATATGAGTGAAGAGATGACCAGCGGCTCATACATAGCTTCGAAGACAAACAAGCTGGACGGAACGTTATCGCGAAGAAATTCAGACCCGGCGAATAAGATTTCACTGTTGGAAACGAACCGTGGCAACGACTTGTACCAGTCTAGCACAAACATCAACATTGGCGGTCATCGATTCCGAAAGGTAACGAGATTAAACAAGGGCGAAAGATGCGCGAGCTGCGACGAGAGCGACTCGTTCATATCCGAGGGCCATCGGTGTTTGGATTGTAAAATTTTAGTGCACACAAAATGCATACAGAACGGCGGCATTAAGAGCATCAAGTGTGGTGCAAAGCGATCAACAAAGCGAACAAAAAAGGTTAGCGAACGCGAGAAAATCAGTTCGGGCTCGCAAACGACACCCAACTCGAAATTCAGCGGTACAAAAGAATACACTGACTCGACGGATAAGATTATAAGCGATGCAAAAGAACTTCAGCTGATGCAAGACTTTATTACACAGAAAATCTGCAAAATGGAGGGCGATAAAGTATCGGAGGTTGATCGAGTGTTTAAGCAGGCTTTGCGAGAATTTAAAGATAATCTCGTCGTACAATATAGCGTTGCACACAAGCAAAATAGCGACTCATTGAACATAAAATACCGCGATCTTATCGCCAATTTCGAGCAAGTTATTGAGACTGCATGTGGAAAAACAGACGACTTTCCGAAAACAATGGGCGTAAATGCATTTCGAGGTTTCATGAATGAATTCATGAACTCTCGTGAATCAGATAAACCGAAGATGAAGAGGAAAAAGGATAAAAAGAGAAAAGCGGATGAACTAATTGCCTTCAATGGTCATCTTTTCCAATTGACAATCATGAATATCGCGACAGTTTGTGAGAATTGTCAGCAGTTCTTATTGTGGCCAATTGAGCGTGGACTAGTCTGCTTAAATTGCTCATTTACTGTTCACAAGAAGTGTCATTTAAAAGCGCCGATGTGTAGCAAGCCAACGCACACTGCGATGAGTGCCAGTGGTGAAGGTGGAAACAATGACAATGGAAAGCTCTTCAAAGTTCATCTCACGCAAATCTGTGCGTCGGAGGGAAGCGGTTCCAAAATTCCAACTCGCATAGATCAACTTATAACGAAGATAGAAATGCACGGACTTTACGCTGAGGGCTTGTATCGAAAGAGTGGACTCTCGTCCAAAATCAAGGAGCTGCAGAGGAAAATGAATGAACCGAACAACGGTGAAATCGATTATGAGTCATATAATGTGCACGTTCTCACAAATGTCCTTAAAACCTTCCTCCGCGATCTTCCCGAACCGTTACTCACGTTCGAACGCTACGATGATTTCTTGCGTGCCGCGGATCTCTCCGACGAGTCGGATCGTGTTCAAACGCTCCTATCACTAATCAAAAAACTACCTCCTGCCCATCACGCTCTCCTCGAAAGAATAGTCTTTCATTTGGCTCGTGTCGCTCAGCGCGAGGAATACAACCGAATGTCTGCCAGCTCGTTGGCAATTGTGTTTGCGCCATGTGTTTTGCGAACAAACAGGCCACTTCAGGCACAAGACAGTCTGAACGATATTAGTCGACAGACGAAATGCATGGAAACAATCATTACGCAAAAAATGCTGAATATCAAGACCACTCTTGCCGATATCGATACGCTTGATACTGCGGCGCACACCGCAACTACTCGTCTTAGCACGCTGCGAAGTTCGAAAGTGTTTACGCAAGAAGAGTTTACGTCGACGTCGCGTGCCGGCCGAGAGTCAGCAGAGGCTGAAGAGATGCTTCTAGAGGGCCACATACAAGAGATTAAGAAGGAGAAGGCCCTGCTGACTTCAACGCTTCCTAGTCTTGCCCGTGCGACCTCCGACGACGACCTGCTGTCGACTGACCTGGACGGCGAAGGCGGAAGTCTCGACGATTTGAGTAGTAAAGATAGGGACCCGGACAGTCATAACAAAATAGGCCGTGAGTCGCGAGAGGTGAGTGTCGACTCTGCCTTGAGCTCGGTCGACGGATGTTCTTCGTCACCTTCGGGTAATCAACGCTTCTCGACTAACAGTAGTGCGGGCGACGAGGACGTGGCTGTGAAGTACAATTTGCGTGAACAATTCATCGATTATATTCCTCCGCGATCGAAGCAGGGCGCAACAATCGTTCATCAGCAGCGATCATCGCAGCCGGTATCGAGGAGCGTTGTGACGTGCACAATTAGTCCGACGACGATTAAGAACGGTAACGAGGCTCGTGAGGGTCAGTCTCGTGGATCAGATCTGCAGAGACAAAAGCCAATCGTGATGAGGAGTATAAGCGGCAGCGGATATGAAGCTTCGAAAAATAGCGCTGCGACATCAGGCGCAAGTGTTGGTCTTCAAAGAGCGGCTACAACAATGGCAGCAATTGATACATCTAACAATAACATCAACAACAACAATAATAATAACAATAATGATGATGATGAAAACGGACGAAAAACAAAGAGTCAAAGCATAGAGGATGAACCAATAATGGTA
Protein: 2276 (aa)
MHSQDTNENARYVLQVYVGALSVHYEALSVEASKQTSAEEIVTCIAERLGLTGNNYELAEVIGNCKERRLSSHEKPVSLKLLWPKHSDPNFGRFYLREKQTNEPTWYGFDPQVLKEFLSQPENREYPDLCQLPNLNEATLLENLRQRFEAGHIYTYVGSILIAVNPFRFLPIYNPKYVRLYQNQRIGLLLPPHIFAIADNAYYCMLKEKRNQCVVISGESGSGKTESTNFLLHHLTALSSKGSHGSGVEQTILSAGPVLEAFGNAKTAHNNNSSRFGKFIQVNYHENGMVQGAVVQKYLLEKSRIVSQGTYERNYHVFYYLLSGATETERETLHLLPAEKYNYLNAKNLTLENCDEKYEFSRLKQSMEMVGFSSEKQRRLFMVLSAVLLLGNVEFHPKKSAYHHDESVNVKNLDVVHLISELLKVKYETLLAALTSKRVKASDETLIMQYKLPEAIAARDALAKCLYETLFNWIVMQVNHALLSKDPNAAPIGNSIGVLDIFGFEDFNGGNYFEQICINYANEHLQYYFNLHVFKYEQKEYKREGIKWTDIEFMDNSGCLHLFESKPTGLLCILDDSCNFPGGSNENLLHKFNIIHKDNPFYEKPQRKENAFIIRHYAGKVKYQVAEMREKNLDLMRQDIVSVLKNSSMAFVRELVGADPVAVFRWAILRAFFRGYFAFRSAGMKHRKERADQSLSKITTKARFRTGNESLVSHLVTLSSVNLVIYRIAKRINPTTTFMALNANNNEPTTNFIHHRVHNSPMHQATTPPRRSWSTFTFNNKNFPDGKLSYESQQSSGDRSSWRNDVNEIVRSRDGRERQDVMARASQIVMKNKSFRPRERPKKGLKNLQSVKTLTAGQNLINNQTAVKTRKQPLTVTAQFQNSLIALMETLNQANPFFIRCIKSNSNKIPNQFDDATVTRQLRYTGMLETVRIRRAGYNVRLTYEEFIQHYRILLPKGLLSSQKDVRDFMSHLMILNNQHYQLGITKIYMRESEKMRLDIKLHTKIIESIVFIQRWFRGILQRQKFLRLRQAAIVLQSNLRTTLARRKFIFHRACFHGAAITIQAAWRMYVERKKYLHIRHTVILLQAHIRGKLARAKIQQNLQKQKHMRERQKLRSTQSLPVNERSVDVHFEQVKRIRTPTPHYSLDADICSEESPSHTRLSKQKRDQMLDQTEQQIKDLLLINKEEQYQIRKTSVPTIDSYHSPYQASLATLPSSTSTSTTTSTTNYRHDDVLDLGSKVYDVEKAMRRSATEDPPTEAALKRFDITKMPIRRVDSGPSRRDIRYDSKNNVQITPRPTPATDVEIVFVNSQQSTLPSTDATTQPTNLTHSPPPATQSLRSSPYNQQYSLETLPQRRDIICRSLNEEYQNIQPPIVYHNQQQQQQQQNDSTAIRSTFSVPPKGKAAALLGTISETSKHGKKEMTDILSKNKRTKNNMSEEMTSGSYIASKTNKLDGTLSRRNSDPANKISLLETNRGNDLYQSSTNINIGGHRFRKVTRLNKGERCASCDESDSFISEGHRCLDCKILVHTKCIQNGGIKSIKCGAKRSTKRTKKVSEREKISSGSQTTPNSKFSGTKEYTDSTDKIISDAKELQLMQDFITQKICKMEGDKVSEVDRVFKQALREFKDNLVVQYSVAHKQNSDSLNIKYRDLIANFEQVIETACGKTDDFPKTMGVNAFRGFMNEFMNSRESDKPKMKRKKDKKRKADELIAFNGHLFQLTIMNIATVCENCQQFLLWPIERGLVCLNCSFTVHKKCHLKAPMCSKPTHTAMSASGEGGNNDNGKLFKVHLTQICASEGSGSKIPTRIDQLITKIEMHGLYAEGLYRKSGLSSKIKELQRKMNEPNNGEIDYESYNVHVLTNVLKTFLRDLPEPLLTFERYDDFLRAADLSDESDRVQTLLSLIKKLPPAHHALLERIVFHLARVAQREEYNRMSASSLAIVFAPCVLRTNRPLQAQDSLNDISRQTKCMETIITQKMLNIKTTLADIDTLDTAAHTATTRLSTLRSSKVFTQEEFTSTSRAGRESAEAEEMLLEGHIQEIKKEKALLTSTLPSLARATSDDDLLSTDLDGEGGSLDDLSSKDRDPDSHNKIGRESREVSVDSALSSVDGCSSSPSGNQRFSTNSSAGDEDVAVKYNLREQFIDYIPPRSKQGATIVHQQRSSQPVSRSVVTCTISPTTIKNGNEAREGQSRGSDLQRQKPIVMRSISGSGYEASKNSAATSGASVGLQRAATTMAAIDTSNNNINNNNNNNNNDDDENGRKTKSQSIEDEPIMV
| Type | Start | End | Length |
| CDS |
24168 |
24212 |
45 |
| CDS |
25987 |
26577 |
591 |
| CDS |
26733 |
26939 |
207 |
| CDS |
27107 |
27809 |
703 |
| CDS |
27881 |
27927 |
47 |
| CDS |
28195 |
28337 |
143 |
| CDS |
28492 |
28627 |
136 |
| CDS |
28716 |
28981 |
266 |
| CDS |
29147 |
29194 |
48 |
| CDS |
29548 |
29850 |
303 |
| CDS |
30415 |
30604 |
190 |
| CDS |
30685 |
30768 |
84 |
| CDS |
31145 |
32588 |
1444 |
| CDS |
32868 |
33806 |
939 |
| CDS |
33878 |
33966 |
89 |
| CDS |
34029 |
35621 |
1593 |
| intron |
24213 |
25986 |
1774 |
| intron |
26578 |
26732 |
155 |
| intron |
26940 |
27106 |
167 |
| intron |
27810 |
27880 |
71 |
| intron |
27928 |
28194 |
267 |
| intron |
28338 |
28491 |
154 |
| intron |
28628 |
28715 |
88 |
| intron |
28982 |
29146 |
165 |
| intron |
29195 |
29547 |
353 |
| intron |
29851 |
30414 |
564 |
| intron |
30605 |
30684 |
80 |
| intron |
30769 |
31144 |
376 |
| intron |
32589 |
32867 |
279 |
| intron |
33807 |
33877 |
71 |
| intron |
33967 |
34028 |
62 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
EEZ98803 |
hypothetical protein TcasGA2_TC001372 [Tribolium castaneum] |
0.0 |
| InterPro |
IPR002219 |
Protein kinase C-like, phorbol ester/diacylglycerol binding |
|
| InterPro |
IPR001609 |
Myosin head, motor domain |
|
| InterPro |
IPR008936 |
Rho GTPase activation protein |
|
| InterPro |
IPR000198 |
Rho GTPase-activating protein domain |
|
| InterPro |
IPR000048 |
IQ motif, EF-hand binding site |
|
| InterPro |
IPR000159 |
Ras-association |
|
| Gene Ontology(BP) |
GO:0007165 |
signal transduction |
|
| Gene Ontology(BP) |
GO:0035556 |
intracellular signal transduction |
|
| Gene Ontology(CC) |
GO:0016459 |
myosin complex |
|
| Gene Ontology(CC) |
GO:0005622 |
intracellular |
|
| Gene Ontology(MF) |
GO:0005515 |
protein binding |
|
| Gene Ontology(MF) |
GO:0005524 |
ATP binding |
|
| Gene Ontology(MF) |
GO:0003774 |
motor activity |
|
| Pfam |
PF00612.22 |
IQ calmodulin-binding motif |
1.7e-13 |
| Pfam |
PF00628.24 |
PHD-finger |
6.8 |
| Pfam |
PF00788.18 |
Ras association (RalGDS/AF-6) domain |
3e-10 |
| Pfam |
PF00130.17 |
Phorbol esters/diacylglycerol binding domain (C1 domain) |
1.8e-09 |
| Pfam |
PF13401.1 |
AAA domain |
0.0014 |
| Pfam |
PF00620.22 |
RhoGAP domain |
5e-45 |
| Pfam |
PF00063.16 |
Myosin head (motor domain) |
1e-209 |
| Pfam |
PF14446.1 |
Prokaryotic RING finger family 1 |
0.17 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| A. gambiae |
AGAP004000 |
| H. sapiens |
ENSP00000398250 |
| P. vanderplanki |
Pv.10969 |
| H. sapiens |
ENSP00000399162 |
| H. sapiens |
ENSP00000457407 |
| H. sapiens |
ENSP00000348349 |
| D. plexippus |
DPOGS213447PA |
| C. quinquefasciatus |
CPIJ008896 |
| P. vanderplanki |
Pv.10970 |
| T. castaneum |
TC001372 |
| M. musculus |
ENSMUSG00000039585 |
| H. sapiens |
ENSP00000380444 |
| H. sapiens |
ENSP00000457945 |
| P. vanderplanki |
Pv.10968 |
| C. quinquefasciatus |
CPIJ008897 |
| A. aegypti |
AAEL004375 |
| H. melpomene |
HMEL007432-PA |
| D. plexippus |
DPOGS202503PA |
| C. quinquefasciatus |
CPIJ008894 |
| A. mellifera |
GB13249-PA |
| B. mori |
BGIBMGA001423-TA |
| N. vitripennis |
NV13827-PA |
| H. sapiens |
ENSP00000456192 |
| H. sapiens |
ENSP00000454446 |
| S. invicta |
SI2.2.0_09798 |
| P. humanus |
PHUM245890-PA |
| M. musculus |
ENSMUSG00000004677 |