MidgeBase gene description page [Pn.13207]
Outline
| Gene ID | Pn.13207 |
| Type | Protein coding gene |
| Scaffold | PnScaf18847 |
| Start | 1737 |
| End | 2903 |
| Direction | - |
Sequence
Transcript: 630 (bp)
ATGAACTTGTACTATCTGGATGTATCGCCTCCGTGTCGAAGTGTGCTCATATTGGGCAAGATGTTGGATCTTGACTTTAATTTGAAAACTGTCAACATTCAGGGTGGTGATCTATTAAAGAAGGAGTTTTTGGATCTCAACCCCACTCACACCGTACCAACATTACAGATTGTAGAATCAGATCTCGTTCTGTGGGAGTCACGCAATTCTGACAAGTATCTATGTACCTTTAGACTATCCTATCTGGTAAATGCCTATGGAAAGGACGAGCACGCACATCTCTATCCGCAAGATGTCGATAAAAGAGCATTGGTTGATTTATACCTTCAATTCGACCTGTCAACGCTTTATCAAAGAACTTATGAATATTTTTTTCCTACTATATTGATCGGTGCAAAACTGGACGAGACAAAGAAAGCGAAGCTTGCCGAAGCTCTAAGATTTTTTGAGGCCATGCTAAAACTAGAGAGAACATTTGCGACGGGCTGTGAATTTACAATAGCCGATTTGTCCTTGTGCATTACTGTCTCGCAAATCGAAGCCTTTGGATTTGACATGCTCCCATATCCAAAAATTAGAAGGTGGATGAAGAGCTGTATACAGAAGCTTGAGCCATACGATTATAACCCT
Protein: 210 (aa)
MNLYYLDVSPPCRSVLILGKMLDLDFNLKTVNIQGGDLLKKEFLDLNPTHTVPTLQIVESDLVLWESRNSDKYLCTFRLSYLVNAYGKDEHAHLYPQDVDKRALVDLYLQFDLSTLYQRTYEYFFPTILIGAKLDETKKAKLAEALRFFEAMLKLERTFATGCEFTIADLSLCITVSQIEAFGFDMLPYPKIRRWMKSCIQKLEPYDYNP
| Type | Start | End | Length |
| CDS |
1740 |
1742 |
3 |
| CDS |
2160 |
2584 |
425 |
| CDS |
2641 |
2674 |
34 |
| CDS |
2736 |
2903 |
168 |
| intron |
1743 |
2159 |
417 |
| intron |
2585 |
2640 |
56 |
| intron |
2675 |
2735 |
61 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_001658010 |
glutathione-s-transferase theta, gst [Aedes aegypti] gb|EAT47841.1| glutathione-s-transferase theta, gst [Aedes aegypti] |
1e-59 |
| InterPro |
IPR010987 |
Glutathione S-transferase, C-terminal-like |
|
| InterPro |
IPR004046 |
Glutathione S-transferase, C-terminal |
|
| InterPro |
IPR017933 |
Glutathione S-transferase/chloride channel, C-terminal |
|
| InterPro |
IPR004045 |
Glutathione S-transferase, N-terminal |
|
| InterPro |
IPR012336 |
Thioredoxin-like fold |
|
| Gene Ontology(MF) |
GO:0005515 |
protein binding |
|
| Pfam |
PF13409.1 |
Glutathione S-transferase, N-terminal domain |
1e-05 |
| Pfam |
PF13410.1 |
Glutathione S-transferase, C-terminal domain |
0.00018 |
| Pfam |
PF02798.15 |
Glutathione S-transferase, N-terminal domain |
6.2e-05 |
| Pfam |
PF13417.1 |
Glutathione S-transferase, N-terminal domain |
2.8e-07 |
| Pfam |
PF00043.20 |
Glutathione S-transferase, C-terminal domain |
7.3e-10 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| D. melanogaster |
FBgn0038029 |
| P. vanderplanki |
Pv.06653 |
| H. melpomene |
HMEL002451-PA |
| A. gambiae |
AGAP004163 |
| N. vitripennis |
NV10582-PA |
| D. plexippus |
DPOGS202622PA |
| B. mori |
BGIBMGA006537-TA |
| A. aegypti |
AAEL001090 |
| C. quinquefasciatus |
CPIJ002660 |
| S. invicta |
SI2.2.0_06674 |