MidgeBase gene description page [Pn.13160]
Outline
| Gene ID | Pn.13160 |
| Type | Protein coding gene |
| Scaffold | PnScaf18665 |
| Start | 714 |
| End | 2313 |
| Direction | + |
Sequence
Transcript: 1473 (bp)
ATGAGTGCATCTTCGCTAGCAATATTTGTGATAGCCATAGGCTTAGTTTATTTATGGATTAAACGGCGCTACAGTTATTGGGCAGATCGGGGATTCCTGCAAGCCCATGCGTCGTTTCCCTTTGGATCGATGAAGGGAGCTGGAACAAGGCTGACGGTTTCGCACTGCTTGGACAAGATCTACAAAGAGTTCAAGGGAAAAGCCCCCGTTGTTGGCTTCTACAAGGCACTGACGCCTCAACTTCTTCCCCTCGACACCGAAATGGTGCAGCTCATTCTCGTGAAAGAGTTTCAGTCCTTTCGCGACCACTCATTTTTCCACAACAAGAAGGACGATCCGCTTTCAGTGAACATTTTGACGCTAAACGGCGAAGAATGGCGCGAACGAAGGCTCAAATTCGCTCCGATTTTCACCTCGGGCAAGATGAAAATGATGTTCGAGATAGTCGACTCGATTGGAGAGAAATTTGCGCAGGCAATAGCGAGAGAATTTGAGAAGTCAAACACCCTAGACATGCAGAGATGGAGCAAGAGATTCATGAGCGATAACATTGGAAACTGCGCATTCGGAATCGACACCAACTGCCTAGATGACGAGGATTCGATCTCGTTTAAAATGGCTCTCCGTATCTCAAATCTCAAGCCGATTGAGGTGCTAAAGTTCTTCCTGGGAATGTGGAATCCGCGATTAGGCAGACTCATTAAGGCGCGTTTCGTTCCAAAGGAGGCTGCCGACTTTTATTTAAGCGTCTTCAAGCAGACGTTCCGAGATCGCCTCAAAAATCCCGTCAACCGCAACGATTTCGTTCAGATGTTGCTGAACCTTAAAGACACCTACACCGAGACAGAGCTGGCCGCTGAAGCTTTCCTGGTCTATGCAGGTGGCTACGAGACTAGCAGCACTCTCCTTATGTTCACCCTCTATGCGCTGGCTCTGGACCAAAATATTCAGGACAAACTGCGGTCGGAAATTCTCGAAGGAATCGAGGCAAATGGCGGGAAATTGACCTACGACATGCTCATCGGCTTCAAGTATCTAAACATGGTCGTTCAGGAGACTCTGCGCTTGTATCCGCCAGTTCCGCTTCTTGCGAGAACATCCACCAAGGAGTACCGCATCCCCGACACAGATCTAGTGATCCCGAAGGGCACGAAAATTATCATCAACAACTTTTCGCTTCAGCGCGATCCCGAATGTTTCCCAGACCCCGAAACATTCAACCCTGAGAGGTTTAACGAGGAAAACGTCGAGAGCGTCGACCAGTTTTCGCATCTACCGTTCGGTGCAGGGCCGAGGATGTGCTTGGGCGAACGATTCGGCCTGATGCAGGCAAAGGTCAGCATCGTGAAGCTTGTGCAGAACTTTATTTTTCTACCGTGCGAAAAGACGACTATACCGATGAGATTTGTAGCGCATACACCTTTTCTGGGGCCTGCGGAGGGTATTTGGTTGAACGTTCAAAAGTATCAAAAG
Protein: 491 (aa)
MSASSLAIFVIAIGLVYLWIKRRYSYWADRGFLQAHASFPFGSMKGAGTRLTVSHCLDKIYKEFKGKAPVVGFYKALTPQLLPLDTEMVQLILVKEFQSFRDHSFFHNKKDDPLSVNILTLNGEEWRERRLKFAPIFTSGKMKMMFEIVDSIGEKFAQAIAREFEKSNTLDMQRWSKRFMSDNIGNCAFGIDTNCLDDEDSISFKMALRISNLKPIEVLKFFLGMWNPRLGRLIKARFVPKEAADFYLSVFKQTFRDRLKNPVNRNDFVQMLLNLKDTYTETELAAEAFLVYAGGYETSSTLLMFTLYALALDQNIQDKLRSEILEGIEANGGKLTYDMLIGFKYLNMVVQETLRLYPPVPLLARTSTKEYRIPDTDLVIPKGTKIIINNFSLQRDPECFPDPETFNPERFNEENVESVDQFSHLPFGAGPRMCLGERFGLMQAKVSIVKLVQNFIFLPCEKTTIPMRFVAHTPFLGPAEGIWLNVQKYQK
| Type | Start | End | Length |
| CDS |
714 |
1063 |
350 |
| CDS |
1121 |
1353 |
233 |
| CDS |
1421 |
2310 |
890 |
| intron |
1064 |
1120 |
57 |
| intron |
1354 |
1420 |
67 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_001653674 |
cytochrome P450 [Aedes aegypti] gb|EAT39031.1| cytochrome P450 [Aedes aegypti] |
1e-108 |
| InterPro |
IPR001128 |
Cytochrome P450 |
|
| InterPro |
IPR017972 |
Cytochrome P450, conserved site |
|
| InterPro |
IPR002401 |
Cytochrome P450, E-class, group I |
|
| Gene Ontology(BP) |
GO:0055114 |
oxidation-reduction process |
|
| Gene Ontology(MF) |
GO:0009055 |
electron carrier activity |
|
| Gene Ontology(MF) |
GO:0020037 |
heme binding |
|
| Gene Ontology(MF) |
GO:0016705 |
oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen |
|
| Gene Ontology(MF) |
GO:0005506 |
iron ion binding |
|
| Pfam |
PF00067.17 |
Cytochrome P450 |
1.8e-93 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
| Gene ID |
| Pn.05363 |
| Pn.05364 |
| Pn.07620 |
Orthologous genes
| Species |
Gene ID |
| N. vitripennis |
NV13219-PA |
| S. invicta |
SI2.2.0_03692 |
| T. castaneum |
TC000152 |
| A. mellifera |
GB15409-PA |
| C. quinquefasciatus |
CPIJ800207 |
| D. plexippus |
DPOGS214883PA |
| D. melanogaster |
FBgn0025454 |
| D. melanogaster |
FBgn0033696 |
| D. plexippus |
DPOGS204386PA |
| N. vitripennis |
NV51438-PA |
| S. invicta |
SI2.2.0_07409 |
| T. castaneum |
TC000151 |
| D. plexippus |
DPOGS205609PA |
| D. plexippus |
DPOGS205608PA |
| P. vanderplanki |
Pv.10407 |
| A. gambiae |
AGAP010961 |
| N. vitripennis |
NV13220-PA |
| S. invicta |
SI2.2.0_05967 |
| S. invicta |
SI2.2.0_15722 |
| S. invicta |
SI2.2.0_01866 |
| P. vanderplanki |
Pv.07746 |
| P. vanderplanki |
Pv.07739 |
| T. castaneum |
TC000153 |
| P. humanus |
PHUM602250-PA |
| S. invicta |
SI2.2.0_07739 |
| P. vanderplanki |
Pv.07743 |
| H. melpomene |
HMEL017463-PA |
| P. vanderplanki |
Pv.10406 |
| P. vanderplanki |
Pv.07745 |
| H. melpomene |
HMEL013081-PA |
| P. vanderplanki |
Pv.06570 |
| T. castaneum |
TC000148 |
| N. vitripennis |
NV15253-PA |
| N. vitripennis |
NV18211-PA |
| A. aegypti |
AAEL004941 |
| N. vitripennis |
NV18292-PA |