MidgeBase gene description page [Pn.13159]
Outline
| Gene ID | Pn.13159 |
| Type | Protein coding gene |
| Scaffold | PnScaf18665 |
| Start | 27 |
| End | 399 |
| Direction | + |
Sequence
Transcript: 297 (bp)
ATGCACGAAAGACGCGACCCTGAGCACTTCCCAGAACCTGAAAAGTTTGACCCCGAAAGGTTCAGCGACGAAAATATTGCGAATGTCAACCAATATGCACATATACCCTTCGCCTCTGGACCGAGAAACTGTTTAGGTAAACGATTTGGCCTAATGCAATCGAAAATTGGCGTTGTGAAGCTTTTGAAAAACTTTGAGTTCGCTCCGTGTGATAAATCGCCCATTCCAATGAAGTTTGTTGCAAACAATCTCTTTTTAGCTCCAGTGGGCGGTATGTGGTTGAATGTGAAGAGAATT
Protein: 99 (aa)
MHERRDPEHFPEPEKFDPERFSDENIANVNQYAHIPFASGPRNCLGKRFGLMQSKIGVVKLLKNFEFAPCDKSPIPMKFVANNLFLAPVGGMWLNVKRI
| Type | Start | End | Length |
| CDS |
27 |
38 |
12 |
| CDS |
112 |
396 |
285 |
| intron |
39 |
111 |
73 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_968370 |
PREDICTED: similar to cytochrome P450 CYP6BK17 [Tribolium castaneum] gb|EFA05683.1| cytochrome P450 6BK11 [Tribolium castaneum] |
3e-25 |
| InterPro |
IPR001128 |
Cytochrome P450 |
|
| InterPro |
IPR002403 |
Cytochrome P450, E-class, group IV |
|
| Gene Ontology(BP) |
GO:0055114 |
oxidation-reduction process |
|
| Gene Ontology(MF) |
GO:0009055 |
electron carrier activity |
|
| Gene Ontology(MF) |
GO:0020037 |
heme binding |
|
| Gene Ontology(MF) |
GO:0016705 |
oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen |
|
| Gene Ontology(MF) |
GO:0005506 |
iron ion binding |
|
| Gene Ontology(MF) |
GO:0004497 |
monooxygenase activity |
|
| Pfam |
PF00067.17 |
Cytochrome P450 |
3e-28 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes