MidgeBase gene description page [Pn.13135]
Outline
| Gene ID | Pn.13135 |
| Type | Protein coding gene |
| Scaffold | PnScaf18588 |
| Start | 2 |
| End | 283 |
| Direction | + |
Sequence
Transcript: 279 (bp)
ATGAAGTGCGACGTCGACATCCGTAAGGACTTGTACGCCAACTCAGTCTTGTCGGGCGGTACCACCATGTACCCGGGTATTGCCGATCGTATGCAAAAGGAAATCACCTCACTCGCCCCATCGACCATCAAGATCAAGATCATCGCTCCACCAGAGCGCAAATACTCCGTCTGGATCGGAGGCTCAATCTTGGCATCACTCTCGACCTTCCAGACCATGTGGATCAGCAAACAAGAGTACGACGAGAGCGGACCAGGCATCGTACACAGAAAGTGCTTC
Protein: 93 (aa)
MKCDVDIRKDLYANSVLSGGTTMYPGIADRMQKEITSLAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQTMWISKQEYDESGPGIVHRKCF
| Type | Start | End | Length |
| CDS |
2 |
280 |
279 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_001862348 |
actin [Culex quinquefasciatus] gb|EDS36953.1| actin [Culex quinquefasciatus] |
8e-48 |
| InterPro |
IPR004001 |
Actin, conserved site |
|
| InterPro |
IPR004000 |
Actin-like |
|
| Gene Ontology(MF) |
GO:0005524 |
ATP binding |
|
| Pfam |
PF00022.14 |
Actin |
4.4e-44 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes