MidgeBase gene description page [Pn.13082]
Outline
| Gene ID | Pn.13082 |
| Type | Protein coding gene |
| Scaffold | PnScaf18385 |
| Start | 104 |
| End | 2319 |
| Direction | - |
Sequence
Transcript: 2079 (bp)
ATGGTGGATTTTTCGTACGGAATCCTAACTGTCTCTGATAGATGCTTTCGAGGCGAAGCCATTGATGAGAGCGGTCCAAAACTTGAAATTTTGCTGAAACAGCATTATAATGCTGTAAAAATTCTCAAAGAGACAGTTCCGGATGAAGAAAAAGTGATTATCCAAAAGCTTCTTCAGTACACCGACCAGGAAAAACTAAACTGCATTATTACAACGGGGGGAAGTGGATGTTCCCCTCGCGATGTAACTCCAGAGGCGACTAGAAAAGTCATTCAAAGAGAATTTTCGCAGTTAACGATGGTTATGCTTCTGGAGGGACTGAAGAAGACCGAGTTCGCGGCACTAACAAGAGGCGTATGTGGGATACGAAATCAAAGCTTGATCATCAACATGCCCGGTAGCGTGAAGGCGTGTTCGGAATGTTTCGGCGCTATAAAGCGGATCTTGCCACACGCTATCGAACTGTTATGCGACATGCGAGACAGCACAGAAAAAACTCATGCAATTATCCAAAGTTCTAGCAATGAAATGTATCAGGACATAAAGGAAAAACTGAGTCTGAGCAGCACTAGAAGAAATGATGAACATTATCTTACAACTCCACCCATCAAGGAGATTGTCTTAGAAAGCTTGTCAACTGACAGTGTCTGTTCTACAAGCGATCATCCTACAAAAGAACCTGAAGAGGAACCGGAACAGGACACTTCTAGCGAATCACAGTTTTCCTTAGCATCTTCGCAGGAAGCTGTGAACTTCCAATCAGCTTTTCAAGAAGTTCCCACCATTAAAAAGCACATTTGTCCACACAAAACTGCAAATCCGGGCGATAAGTCTGATAGAAATTCACCTTATCCTATGATTGACATTGAAGAGGCCTTGCAAAAAGTTCTCAACAATACTACACGCATATCAAAATCAAAAACATTCAAGAGCCCAATGAATTGTCCTCCCTTTAGAGCGAGCATCAAGGACGGATACGCCGTAAAGTCTTCATCAAGATCAAAACTCAAGTCAGTCATTAGTTCAATCTCTGCGGGCGATCCAATCGTGCGCGGCGACTTTAAGGATGACGAATGCTACAAAATCAATACTGGTGCGGCAGTTCCTCTGCATGCCGATGCAGTTGTTCAAGTGGAAGATACTATTTTGAAAAAATCCTATGGTAACGGCAGAGAGTCTCTCATTGAGTTGAAAGTGTTGCCGGCTAAAAATCAAGACATTCGTGAAATCGGGTGCGATCTTAAAGAGAATGAAGTGCTTTTCACCACGGACGGTATGATGGATGTTGCTCAAAAGACTATTTTGGCCTCAGTTGGTCTGCACACTACAGAGTTTAAGCCACGAATTGCAATCATTTCGACAGGTGATGAGCTGAGAGCACCTGACTCTGGCGAGCTTGATGAGGGACAAATTTACGATTCAAACACAACCATGCTGAAGCTCTTATGCGAAAAATATAATTTTGACGTTTCATTCACGCAAATAGCCAAGGACAGCTACGAATCACTCAAAAGTGCCGTTGAAAATGCAATGTCGAAGTGTCAAGTTATCATCAGCTCGGGAGGTGTATCGATGGGAGACAAAGACTTTGTCAAAAAATTGCTCATTGATATGGGCTACGTGATTCATTTCGGAAGAGTCAATGTGAAGCCGGGTAAACCGATGACGTATGCGACATTGGGCGAAAAATGTTCTTTCTTTGCATTGCCTGGAAATCCTGTGTCGGCTTTCGTCACCTTCCACATATTTGTTCTTCCTGCTCTACGAAAAATGTGTGGCTTCCCGGATGGAAAATGTCATTTGCCCCAAATCAATGTCACACTTCAGGGTGTCAATTATGAGTTGGATGAAAGACCAGAATTTGTGAGAGCAACCTTAAAATTAAATTCGAAGAGGGGAATTTTTAATGCTTATGTGACCAATAATCAGATGAGTAGCAGAATCGCAAGTTTGATACATGCAGACGCCCTTCTTCAGTTTCCGGCTAGATCAGAATCTAAGGAGTCCATGCTGAAACCAGGAGCGCAACTTAAGGCCACTGTCATAGATCAATTCTTTCTAACGTCGTTTAATGATAAC
Protein: 693 (aa)
MVDFSYGILTVSDRCFRGEAIDESGPKLEILLKQHYNAVKILKETVPDEEKVIIQKLLQYTDQEKLNCIITTGGSGCSPRDVTPEATRKVIQREFSQLTMVMLLEGLKKTEFAALTRGVCGIRNQSLIINMPGSVKACSECFGAIKRILPHAIELLCDMRDSTEKTHAIIQSSSNEMYQDIKEKLSLSSTRRNDEHYLTTPPIKEIVLESLSTDSVCSTSDHPTKEPEEEPEQDTSSESQFSLASSQEAVNFQSAFQEVPTIKKHICPHKTANPGDKSDRNSPYPMIDIEEALQKVLNNTTRISKSKTFKSPMNCPPFRASIKDGYAVKSSSRSKLKSVISSISAGDPIVRGDFKDDECYKINTGAAVPLHADAVVQVEDTILKKSYGNGRESLIELKVLPAKNQDIREIGCDLKENEVLFTTDGMMDVAQKTILASVGLHTTEFKPRIAIISTGDELRAPDSGELDEGQIYDSNTTMLKLLCEKYNFDVSFTQIAKDSYESLKSAVENAMSKCQVIISSGGVSMGDKDFVKKLLIDMGYVIHFGRVNVKPGKPMTYATLGEKCSFFALPGNPVSAFVTFHIFVLPALRKMCGFPDGKCHLPQINVTLQGVNYELDERPEFVRATLKLNSKRGIFNAYVTNNQMSSRIASLIHADALLQFPARSESKESMLKPGAQLKATVIDQFFLTSFNDN
| Type | Start | End | Length |
| CDS |
107 |
1835 |
1729 |
| CDS |
1906 |
2224 |
319 |
| CDS |
2289 |
2319 |
31 |
| intron |
1836 |
1905 |
70 |
| intron |
2225 |
2288 |
64 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_002130264 |
PREDICTED: similar to gephyrin [Ciona intestinalis] |
1e-106 |
| InterPro |
IPR020817 |
Molybdenum cofactor synthesis |
|
| InterPro |
IPR005110 |
MoeA, N-terminal and linker domain |
|
| InterPro |
IPR005111 |
MoeA, C-terminal, domain IV |
|
| InterPro |
IPR001453 |
Molybdopterin binding |
|
| Gene Ontology(BP) |
GO:0006777 |
Mo-molybdopterin cofactor biosynthetic process |
|
| Gene Ontology(BP) |
GO:0032324 |
molybdopterin cofactor biosynthetic process |
|
| Pfam |
PF03454.10 |
MoeA C-terminal region (domain IV) |
1.6e-08 |
| Pfam |
PF00994.19 |
Probable molybdopterin binding domain |
7.4e-56 |
| Pfam |
PF03453.12 |
MoeA N-terminal region (domain I and II) |
1e-26 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| S. invicta |
SI2.2.0_01908 |
| H. sapiens |
ENSP00000312771 |
| C. quinquefasciatus |
CPIJ004319 |
| P. humanus |
PHUM220040-PA |
| H. melpomene |
HMEL006855-PA |
| H. sapiens |
ENSP00000438404 |
| H. sapiens |
ENSP00000303019 |
| M. musculus |
ENSMUSG00000047454 |
| A. mellifera |
GB11831-PA |
| D. plexippus |
DPOGS206899PA |
| H. sapiens |
ENSP00000417901 |
| B. mori |
BGIBMGA012855-TA |
| H. sapiens |
ENSP00000452220 |
| N. vitripennis |
NV17405-PA |
| D. melanogaster |
FBgn0000316 |
| A. aegypti |
AAEL009179 |
| T. castaneum |
TC008136 |
| A. gambiae |
AGAP002800 |