MidgeBase gene description page [Pn.13079]
Outline
| Gene ID | Pn.13079 |
| Type | Protein coding gene |
| Scaffold | PnScaf18354 |
| Start | 22890 |
| End | 24667 |
| Direction | + |
Sequence
Transcript: 1275 (bp)
ATGCTTCCAGTTGTCCTGATTTCACTGCTCTTCGCTATAAGCGCGGCATTCGCGAGTGTTTCGCAGCACAATGAGTTCTATTGCTTCTCCACGGATCCCATTCCGTGCACACCTGCGAAATTTTGGCTGTTGAGTCGTCATGGCACGCGTCTTCCCTCGAAGGGCGACATCACGGGCATTCTCAATAACTACGACAACATTCACCGTTCCACAATCAGGAACTATAATGAGGGCAGGACGTCGCTGTGTGCACTTGATTTTCAGTTGCTTGAGCAATGGGCCTTCGATACGAACATAACACTTGACAAGGAGCAGTACTTGACTGTTTCGGGATGGAACGAGCTCGAGGGTTTGGGTCGTCGATACTCGGAAGCGTTTCCTACTCTCTTGCCGAGAAATTATTCGCGAAACGACTTCTTCTTCCGCACAACTTACAAGCAGAGAACGCAAGCTAGTCTGAAGGCATTCGCCGACGGTGTCTTCGGTCACGACGGACACACTCAAGTGGCATTCGAAGACGTTCCGGAGCCAGACTTTTTGCTGCGACCGCACGACAACTGCGAGCTGTATGACGAAGTAATTGAGAACAAAATCGAGCAGGCTGCCTTCAGGGAGGGACCGGAGTTTCAGCAAATGTTGACACAAGTCAGCGAGAAGCTTGGCTTTCGTGGCTCGAGGCAACTGCGAGCCGACGAGATAGAAGCGATAACAAATTTATGTAAATTTGAGCAAATTTGGTATTTAGATGAGCCATCGCCATGGTGCGGCGCCTTTTCGGTTGCAAATCATGCCGTGCTTGAGTACCTCGAGGATCTCGACTACTTCTGGCGAGTTGGCTACGGTTACACGGAGTTCAGAACGCTATTTGAGAACATGAACTGTCACTTGATGCAAAACTTGCTGACATTTATCACGTCAGACGATCCGAATGATCATTTGGCGCGCATTTTTAGCACACACTCGACAATACTTCAGCTGATAATCGTCACTTTGGGAGTTTTCGAAGATGAAGTTCCGCTGACACGTCATAATTTCGCACAGCAGACGTTCAGACAGTGGCGCAGCAGCCTTATTGCACCGATGGGAACGAACTTGGCTGTAATCAAATACTCATGCGCTGATGGCGATGATGACTTGCTGTTTTTGTTCAATGAAAAACCGCTGCACATCGAGGGATGCCAGGCGAACGGACTGTGTAAACAATCGCTGATTGTCGAGAGGTTTAGCCGGTTCATGAATGGAGATTGCCGAGAGATTTTCTGCAGCAACTCGAGA
Protein: 425 (aa)
MLPVVLISLLFAISAAFASVSQHNEFYCFSTDPIPCTPAKFWLLSRHGTRLPSKGDITGILNNYDNIHRSTIRNYNEGRTSLCALDFQLLEQWAFDTNITLDKEQYLTVSGWNELEGLGRRYSEAFPTLLPRNYSRNDFFFRTTYKQRTQASLKAFADGVFGHDGHTQVAFEDVPEPDFLLRPHDNCELYDEVIENKIEQAAFREGPEFQQMLTQVSEKLGFRGSRQLRADEIEAITNLCKFEQIWYLDEPSPWCGAFSVANHAVLEYLEDLDYFWRVGYGYTEFRTLFENMNCHLMQNLLTFITSDDPNDHLARIFSTHSTILQLIIVTLGVFEDEVPLTRHNFAQQTFRQWRSSLIAPMGTNLAVIKYSCADGDDDLLFLFNEKPLHIEGCQANGLCKQSLIVERFSRFMNGDCREIFCSNSR
| Type | Start | End | Length |
| CDS |
22890 |
22992 |
103 |
| CDS |
23136 |
23174 |
39 |
| CDS |
23284 |
23959 |
676 |
| CDS |
24151 |
24444 |
294 |
| CDS |
24502 |
24664 |
163 |
| intron |
22993 |
23135 |
143 |
| intron |
23175 |
23283 |
109 |
| intron |
23960 |
24150 |
191 |
| intron |
24445 |
24501 |
57 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_001661709 |
multiple inositol polyphosphate phosphatase [Aedes aegypti] gb|EAT36389.1| multiple inositol polyphosphate phosphatase [Aedes aegypti] |
4e-72 |
| InterPro |
IPR000560 |
Histidine phosphatase superfamily, clade-2 |
|
| InterPro |
IPR016274 |
Histidine acid phosphatase, eukaryotic |
|
| Gene Ontology(MF) |
GO:0003993 |
acid phosphatase activity |
|
| Gene Ontology(MF) |
GO:0016791 |
phosphatase activity |
|
| Pfam |
PF00328.17 |
Histidine phosphatase superfamily (branch 2) |
2.7e-24 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
| Gene ID |
| Pn.13077 |
| Pn.13078 |
| Pn.15974 |
| Pn.13075 |
| Pn.13076 |
Orthologous genes
| Species |
Gene ID |
| H. melpomene |
HMEL017128-PA |
| P. vanderplanki |
Pv.17121 |
| D. plexippus |
DPOGS216080PA |
| P. vanderplanki |
Pv.17122 |