MidgeBase gene description page [Pn.13034]
Outline
| Gene ID | Pn.13034 |
| Type | Protein coding gene |
| Scaffold | PnScaf18312 |
| Start | 48275 |
| End | 49144 |
| Direction | - |
Sequence
Transcript: 729 (bp)
ATGCCCGCATCAGCTCTAGTTTTGAAAGACGAGCAAGCCGTCCTCAAAAGGTTTCAGATTTTAATAGAAGAAGTGGCCAACGAGTCTATTAGCAGTCGCGGTAAATTCTTCATTGGATTTTCAGGCGGCTCGCTGGGAAAGTATTTGTGTCAAACGCTGCCCAATGTCAAAACCGATTGGAGCAAGTGGACGATCTTTTTCTGCGATGAGCGCTATGTCGAGGAATCTGATAACGATTCGACGTTCGGCTTCTATAAGAGCAACCTGATACCTTTGGTGCCCTTGACCGAAAAGCAGTTCGTTTCCATCAACGTCAATGATCCGGTGGAGAAAGTTGCTGACGATTACGAGAGGACTATTCGTGAGAATTTCGGAGTAAGCGAAGGCATTCCATCGTTCGATATGCTGCTGCTTGGTGTCGGCCCAGACGGACACACTGCTTCTCTGTTTCCTGGTCACTCGCTATTGAATGTCACCGATAAGCTCATCACTTATATCACCGACTCGCCTAAACCACCGCCGAAGAGAATTACAATGACTTATCCGCTCATCAACAATGCTCGATACTCCGTCTTTACGGTTCCCGGGAAGGGCAAGGCAGACATAATAAAGAAGATTTTCGAAACGAAGGAAGACCTGCCTGCAGGCAGAGTAAATTCGAAGAAAGTTTTGTGGCTGCTCGACGAGGACTCCGCCTCAGAATCCTCAATCACATTCGAGCAAACTGCC
Protein: 243 (aa)
MPASALVLKDEQAVLKRFQILIEEVANESISSRGKFFIGFSGGSLGKYLCQTLPNVKTDWSKWTIFFCDERYVEESDNDSTFGFYKSNLIPLVPLTEKQFVSINVNDPVEKVADDYERTIRENFGVSEGIPSFDMLLLGVGPDGHTASLFPGHSLLNVTDKLITYITDSPKPPPKRITMTYPLINNARYSVFTVPGKGKADIIKKIFETKEDLPAGRVNSKKVLWLLDEDSASESSITFEQTA
| Type | Start | End | Length |
| CDS |
48278 |
48758 |
481 |
| CDS |
48824 |
48947 |
124 |
| CDS |
49021 |
49144 |
124 |
| intron |
48759 |
48823 |
65 |
| intron |
48948 |
49020 |
73 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
EHJ74995 |
6-phosphogluconolactonase [Danaus plexippus] |
5e-61 |
| InterPro |
IPR006148 |
Glucosamine/galactosamine-6-phosphate isomerase |
|
| InterPro |
IPR005900 |
6-phosphogluconolactonase, DevB-type |
|
| Gene Ontology(BP) |
GO:0006098 |
pentose-phosphate shunt |
|
| Gene Ontology(BP) |
GO:0005975 |
carbohydrate metabolic process |
|
| Gene Ontology(MF) |
GO:0017057 |
6-phosphogluconolactonase activity |
|
| Pfam |
PF01182.15 |
Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase |
4.7e-56 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| P. humanus |
PHUM097930-PA |
| A. aegypti |
AAEL014204 |
| A. mellifera |
GB17544-PA |
| M. musculus |
ENSMUSG00000031807 |
| N. vitripennis |
NV13271-PA |
| D. melanogaster |
FBgn0030239 |
| S. invicta |
SI2.2.0_15871 |
| H. melpomene |
HMEL017350-PA |
| A. gambiae |
AGAP010866 |
| H. sapiens |
ENSP00000252603 |
| P. vanderplanki |
Pv.08054 |
| B. mori |
BGIBMGA013916-TA |
| D. plexippus |
DPOGS211719PA |
| T. castaneum |
TC005667 |