MidgeBase gene description page [Pn.13012]
Outline
| Gene ID | Pn.13012 |
| Type | Protein coding gene |
| Scaffold | PnScaf18260 |
| Start | 22436 |
| End | 22735 |
| Direction | + |
Sequence
Transcript: 297 (bp)
ATGGAGAAAAGCTTCAGGTACAACGACTCCAACGACCAGTGCTTAGAGGGTCAGAGGCAGTTGAGTCTCATAAACTGCTACCATCAAGGCGGACCACAGCTGTGGGTTTTCAACATCACGACAAGGCAGATTTTCTATCCTCGCATGAACAAGTGCCTAACTGCCTTGAAACCGAACGACAACCTCGCACTCGCCGACTGCGATGAGAATTCGAATTTCCAAAAGTGGCTGTGGGCACGAGAGAACATCACAGCCCTAGCCAACTGGAACAGCACGGGCATTGACAATGAAAATGTT
Protein: 99 (aa)
MEKSFRYNDSNDQCLEGQRQLSLINCYHQGGPQLWVFNITTRQIFYPRMNKCLTALKPNDNLALADCDENSNFQKWLWARENITALANWNSTGIDNENV
| Type | Start | End | Length |
| CDS |
22436 |
22732 |
297 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
NA |
No hit found |
NA |
| InterPro |
IPR000772 |
Ricin B lectin domain |
|
| Pfam |
PF00652.17 |
Ricin-type beta-trefoil lectin domain |
3.9e-08 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes