MidgeBase gene description page [Pn.12961]
Outline
| Gene ID | Pn.12961 |
| Type | Protein coding gene |
| Scaffold | PnScaf18143 |
| Start | 19062 |
| End | 20630 |
| Direction | + |
Sequence
Transcript: 405 (bp)
ATGTTCGTAACATCAGCTGCCCGAGTTGCTCCACGCATTGTTGCCAACGGCACAAAAGCCTACCTTAGACCATTGAGCAGTGCTGTCATCTCACAAAGCCAGACATTAGCTGCTCAAAACACAACACCCGTTGCTCTTCTGCCACAAGTCAGGTCATTCCAGACATCAGTAGTCAAGAATGATATTGATTCAGCAGCTAAATTCATCGGTGCTGGTGCTGCCACAGTAGGTGTAGCCGGTTCTGGTGCTGGTATCGGAACAGTATTCGGTTCACTCATCATCGGTTATGCCAGAAATCCATCACTCAAGCAACAATTGTTCTCATATGCTATCTTGGGTTTCGCCTTGTCTGAAGCTATGGGACTTTTCTGTCTTATGATGGCTTTCTTGCTGTTGTTCGCTTTC
Protein: 135 (aa)
MFVTSAARVAPRIVANGTKAYLRPLSSAVISQSQTLAAQNTTPVALLPQVRSFQTSVVKNDIDSAAKFIGAGAATVGVAGSGAGIGTVFGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMMAFLLLFAF
| Type | Start | End | Length |
| CDS |
19062 |
19100 |
39 |
| CDS |
19379 |
19583 |
205 |
| CDS |
20467 |
20627 |
161 |
| intron |
19101 |
19378 |
278 |
| intron |
19584 |
20466 |
883 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
AAV90735 |
mitochondrial ATP synthase lipid binding protein precursor [Aedes albopictus] |
9e-63 |
| InterPro |
IPR020537 |
ATPase, F0 complex, subunit C, DCCD-binding site |
|
| InterPro |
IPR002379 |
ATPase, F0/V0 complex, subunit C |
|
| InterPro |
IPR000454 |
ATPase, F0 complex, subunit C |
|
| Gene Ontology(BP) |
GO:0015986 |
ATP synthesis coupled proton transport |
|
| Gene Ontology(BP) |
GO:0015991 |
ATP hydrolysis coupled proton transport |
|
| Gene Ontology(CC) |
GO:0045263 |
proton-transporting ATP synthase complex, coupling factor F(o) |
|
| Gene Ontology(CC) |
GO:0033177 |
proton-transporting two-sector ATPase complex, proton-transporting domain |
|
| Gene Ontology(MF) |
GO:0015078 |
hydrogen ion transmembrane transporter activity |
|
| Pfam |
PF00137.16 |
ATP synthase subunit C |
3e-17 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| A. aegypti |
AAEL006256 |
| H. sapiens |
ENSP00000447317 |
| T. castaneum |
TC011455 |
| D. melanogaster |
FBgn0039830 |
| P. vanderplanki |
Pv.05445 |
| P. humanus |
PHUM412530-PA |
| A. gambiae |
AGAP000523 |
| C. quinquefasciatus |
CPIJ008101 |
| M. musculus |
ENSMUSG00000006057 |
| H. sapiens |
ENSP00000377033 |
| H. sapiens |
ENSP00000422950 |
| M. musculus |
ENSMUSG00000062683 |
| H. sapiens |
ENSP00000426094 |
| M. musculus |
ENSMUSG00000066724 |
| H. sapiens |
ENSP00000348205 |
| N. vitripennis |
NV15655-PD |
| N. vitripennis |
NV15655-PA |
| H. sapiens |
ENSP00000377878 |
| S. invicta |
SI2.2.0_13286 |
| M. musculus |
ENSMUSG00000068120 |
| A. aegypti |
AAEL012740 |
| A. mellifera |
GB16842-PA |
| H. melpomene |
HMEL007923-PA |
| H. sapiens |
ENSP00000340315 |
| B. mori |
BGIBMGA006412-TA |
| N. vitripennis |
NV15655-PC |
| N. vitripennis |
NV15655-PB |
| D. plexippus |
DPOGS208224PA |