MidgeBase gene description page [Pn.12792]
Outline
| Gene ID | Pn.12792 |
| Type | Protein coding gene |
| Scaffold | PnScaf17696 |
| Start | 279 |
| End | 1762 |
| Direction | + |
Sequence
Transcript: 831 (bp)
ATGACGGTTTCGAACGAGTTGGCTCCTTCTTGTAAGGTGATTTTCGAAGTCACTCGTACTGCTTTCAAAAAGTATCCATTGTCTGGAATTATATGGCGCGAAAGCATGACGTACACCAATAACATATTTTACTATTGGTTTCTCACAATCCTTTGTCAATTGCTGCCAGCAGTCATAATTGACTTTTCCTTAATTCTAATTGGAAGGAAGCAAATAATGATGCACTCTCAGCGGAAACTCATTGCCTTTTTCAAAGATCTACGATTTTTCGTGACAACCAGTTTCAACGTCAACATCGAAAACTTTGAGAAACTTTGGGGTATTCAAACTGAGGACGATCGTTTACTATTTCCAATTAACGTTCGCAACTTTTCCATCGAAAAATATCTTGAGATTTACTACATGGCAACTCGAGTACATAACGCGAAAGATCCAATGTCGACGGTTGAAAAAAGCAAGAGACGACTGAAAGTCAAGCTTCCTCTTCGGTTTAAAATTAAAATCTTCAACTCCAACGTCAATTCGGTGCTCATGTACGATTGTGAAACCTGGAAAGCCACACAAAGCTGCATCAAGGAAACTCCAAGTCTTAACCAACAGATGTTTGTTGACAATATGCGGTTGAAGAGTTCATCAGCAACATCGACTTGCTCACTCGAATCAACCAGACAAGCCATGTCGTGGAACCCACCGAGCAGACAAAGACAAGGTCGAGCAGCTCAGCAAGGCAAGAACTTCAATGAACTGGCAGGTTCAACAAGAAATCGTTCAAGAATTAGCAGTTTTGTGAGCGCTCTTCGCTTCATCGTGGAGCCATATCATCATCACCAA
Protein: 277 (aa)
MTVSNELAPSCKVIFEVTRTAFKKYPLSGIIWRESMTYTNNIFYYWFLTILCQLLPAVIIDFSLILIGRKQIMMHSQRKLIAFFKDLRFFVTTSFNVNIENFEKLWGIQTEDDRLLFPINVRNFSIEKYLEIYYMATRVHNAKDPMSTVEKSKRRLKVKLPLRFKIKIFNSNVNSVLMYDCETWKATQSCIKETPSLNQQMFVDNMRLKSSSATSTCSLESTRQAMSWNPPSRQRQGRAAQQGKNFNELAGSTRNRSRISSFVSALRFIVEPYHHHQ
| Type | Start | End | Length |
| CDS |
279 |
493 |
215 |
| CDS |
560 |
691 |
132 |
| CDS |
750 |
875 |
126 |
| CDS |
1402 |
1759 |
358 |
| intron |
494 |
559 |
66 |
| intron |
692 |
749 |
58 |
| intron |
876 |
1401 |
526 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_002005329 |
GI19138 [Drosophila mojavensis] gb|EDW09264.1| GI19138 [Drosophila mojavensis] |
8e-15 |
| InterPro |
IPR004262 |
Male sterility |
|
| Gene Ontology(BP) |
GO:0055114 |
oxidation-reduction process |
|
| Gene Ontology(MF) |
GO:0016620 |
oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor |
|
| Pfam |
PF03015.14 |
Male sterility protein |
5.4e-13 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
| Gene ID |
| Pn.16205 |
| Pn.09566 |
| Pn.07794 |
Orthologous genes