MidgeBase gene description page [Pn.12749]
Outline
| Gene ID | Pn.12749 |
| Type | Protein coding gene |
| Scaffold | PnScaf17512 |
| Start | 17035 |
| End | 18385 |
| Direction | - |
Sequence
Transcript: 948 (bp)
ATGAGTGACCTCAATCATTTGCCATCGTTTCAGAAAATTGAAAAGATTGGCGAAGGAGCGTATGGAGTTGTTTACAGAGCAAAACACAAGCACAATGGCATCGATGTGGCTCTCAAAAAAATTCGCTTGGAAAGTGAAACAGAAGGAATACCGTCGACGGCAATGCGAGAAATATCCCTGCTTAAAAACATGAAGCACCATTCAATTGTGCAACTCTTTGACGTTATTGTTGCTGGCGGTTGCATTTACATGGTCTTCGAATACCTCGATTTGGACCTAAAAAAGCTGCTCGATCGCAAAAAGAGTATGCTGACTCCAAAGCTCGTAAAGAGCTACATGCACCAGCTTTTAGAAGCCATCGACTACTGTCACATGAATCGCATTCTTCATAGGGACCTTAAACCACAAAATTTGCTACTCGACTGCGGAGGACATATAAAATTAGGAGATTTTGGTCTTGCTCGCACATTCAACATCCCATTGAGGGCATACACTCACGAAGTAGTCACACTGTGGTATCGTGCACCAGAAATTTTACTTGGTTGCAAACTCTACTCGACTGGCGTTGATCTGTGGAGCCTCGGATGCATTTTTGCAGAAATGATGATGCTCCGGCCGATGTTTCAAGGCGACAGCGAAATCGATCAACTCTATAGAATATTCCGGCAGTTCGGAACGCCCGACGAGACTGTCTGGAAGAATATTCACCATTTACCCGACTACAAAGCCTCTTTTCCGAAGTGGGAGCGGCAAGGCCTTCCACATCGCTTTTACAATGATAATGATGCCATCGACCTGTTTCTTTCAATGATGAAATATGACCCCGATCAAAGGATCTCAGCCAAAGATGCTCTTAATCATCGGTACTTTGACAATGTTGTTCTCGTTCCCGTTGATCTGCCTCTGCCGCCTGGAACTCTACCTTCAAATACAAGTCAATACATGTTG
Protein: 316 (aa)
MSDLNHLPSFQKIEKIGEGAYGVVYRAKHKHNGIDVALKKIRLESETEGIPSTAMREISLLKNMKHHSIVQLFDVIVAGGCIYMVFEYLDLDLKKLLDRKKSMLTPKLVKSYMHQLLEAIDYCHMNRILHRDLKPQNLLLDCGGHIKLGDFGLARTFNIPLRAYTHEVVTLWYRAPEILLGCKLYSTGVDLWSLGCIFAEMMMLRPMFQGDSEIDQLYRIFRQFGTPDETVWKNIHHLPDYKASFPKWERQGLPHRFYNDNDAIDLFLSMMKYDPDQRISAKDALNHRYFDNVVLVPVDLPLPPGTLPSNTSQYML
| Type | Start | End | Length |
| CDS |
17038 |
17537 |
500 |
| CDS |
17612 |
17925 |
314 |
| CDS |
18168 |
18256 |
89 |
| CDS |
18341 |
18385 |
45 |
| intron |
17538 |
17611 |
74 |
| intron |
17926 |
18167 |
242 |
| intron |
18257 |
18340 |
84 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_001954542 |
GF16690 [Drosophila ananassae] gb|EDV43103.1| GF16690 [Drosophila ananassae] |
1e-118 |
| InterPro |
IPR017441 |
Protein kinase, ATP binding site |
|
| InterPro |
IPR000719 |
Protein kinase, catalytic domain |
|
| InterPro |
IPR002290 |
Serine/threonine- / dual-specificity protein kinase, catalytic domain |
|
| InterPro |
IPR020635 |
Tyrosine-protein kinase, catalytic domain |
|
| InterPro |
IPR011009 |
Protein kinase-like domain |
|
| InterPro |
IPR008271 |
Serine/threonine-protein kinase, active site |
|
| Gene Ontology(BP) |
GO:0006468 |
protein phosphorylation |
|
| Gene Ontology(MF) |
GO:0004713 |
protein tyrosine kinase activity |
|
| Gene Ontology(MF) |
GO:0004674 |
protein serine/threonine kinase activity |
|
| Gene Ontology(MF) |
GO:0005524 |
ATP binding |
|
| Gene Ontology(MF) |
GO:0004672 |
protein kinase activity |
|
| Gene Ontology(MF) |
GO:0016772 |
transferase activity, transferring phosphorus-containing groups |
|
| Pfam |
PF00069.20 |
Protein kinase domain |
3.3e-73 |
| Pfam |
PF06293.9 |
Lipopolysaccharide kinase (Kdo/WaaP) family |
0.082 |
| Pfam |
PF01636.18 |
Phosphotransferase enzyme family |
0.041 |
| Pfam |
PF07714.12 |
Protein tyrosine kinase |
2.3e-36 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| D. plexippus |
DPOGS210561PA |
| M. musculus |
ENSMUSG00000025358 |
| C. quinquefasciatus |
CPIJ011080 |
| H. sapiens |
ENSP00000400088 |
| H. sapiens |
ENSP00000243067 |
| A. aegypti |
AAEL012339 |
| H. sapiens |
ENSP00000393605 |
| H. sapiens |
ENSP00000410561 |
| H. sapiens |
ENSP00000266970 |
| S. invicta |
SI2.2.0_09559 |
| B. mori |
BGIBMGA013453-TA |
| P. vanderplanki |
Pv.13237 |
| A. gambiae |
AGAP004579 |
| D. melanogaster |
FBgn0004107 |
| H. melpomene |
HMEL009554-PA |
| H. sapiens |
ENSP00000452514 |
| A. aegypti |
AAEL013329 |
| N. vitripennis |
NV13875-PA |
| A. mellifera |
GB17783-PA |
| P. humanus |
PHUM190130-PA |