MidgeBase gene description page [Pn.12741]
Outline
| Gene ID | Pn.12741 |
| Type | Protein coding gene |
| Scaffold | PnScaf17495 |
| Start | 221 |
| End | 1575 |
| Direction | + |
Sequence
Transcript: 867 (bp)
ATGGCACAAACCAGCAATAGCTATTTATCTAAAAAAATTATTTTAGATCCAATCAAAGGATGGACCGATAACTTAAATGGACCCGCTGGAATGATGATTGGTGCTGGAAAAGGCGTCATAAGAACTATTTATTGTGATCAAAAAAGCTATGGCGATTTTCTTCCTGTAGATGTCGCCATTAATGGTCTAATGGTTTGCACTTGGAATTACATTTCGTTCAATGATAAGAACCACTACATTGTTAATTTTACAAGCTCGCAGGACATTCGAGTGACTTGGGAAGCTATACTAGACATGGGTCAGGAAATAATCGGAGGAAAATATCCGTTAAATCAGATACTTTGGTATCCTGGAGGTGGAATGTCAAAGTACCGTTGGGTCCATAAGGTGAAGGCGTTCTTGTTCCATTGGATACCGGCATTTTTCATCGATACAATTCTTTTTTGTTTGGGCTTTAAACCAATATTATGGCGAGTTCATGAGAGAATTGCGAAGGGAATGGAAGTGCTTGAATATTATGCTAATAATCAATGGGACTTTGACAATAAGCATGCAATAATTATAAGGGCAAGAATGAATGAAACTGAGCTTAAGAAGTATAAGGTAGATGCAAAAGGCATTGATATTTATAATTATTTTGAGAATTGTATACTCGGTAGCAGGAGATACTTGCTTAAACAAACCGATGATATGCTACCATCTGCTAGACGTATGATGAAAGTCATGTATGTCATTGATAAATTGTGCAAAGCACTGATATATGGAAGCATTCTTTACTGGCTCGCTAAAAAATTGCTTCCGTTATTTATTACACGCGAAGCTTTAAATGACTTTTATTCGTCCATTTTTAACACATTTAATATATCG
Protein: 289 (aa)
MAQTSNSYLSKKIILDPIKGWTDNLNGPAGMMIGAGKGVIRTIYCDQKSYGDFLPVDVAINGLMVCTWNYISFNDKNHYIVNFTSSQDIRVTWEAILDMGQEIIGGKYPLNQILWYPGGGMSKYRWVHKVKAFLFHWIPAFFIDTILFCLGFKPILWRVHERIAKGMEVLEYYANNQWDFDNKHAIIIRARMNETELKKYKVDAKGIDIYNYFENCILGSRRYLLKQTDDMLPSARRMMKVMYVIDKLCKALIYGSILYWLAKKLLPLFITREALNDFYSSIFNTFNIS
| Type | Start | End | Length |
| CDS |
221 |
237 |
17 |
| CDS |
526 |
591 |
66 |
| CDS |
666 |
803 |
138 |
| CDS |
858 |
991 |
134 |
| CDS |
1061 |
1572 |
512 |
| intron |
238 |
525 |
288 |
| intron |
592 |
665 |
74 |
| intron |
804 |
857 |
54 |
| intron |
992 |
1060 |
69 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_315515 |
AGAP005515-PA [Anopheles gambiae str. PEST] gb|EAA11865.4| AGAP005515-PA [Anopheles gambiae str. PEST] |
2e-89 |
| InterPro |
IPR004262 |
Male sterility |
|
| InterPro |
IPR013120 |
Male sterility, NAD-binding |
|
| Gene Ontology(BP) |
GO:0055114 |
oxidation-reduction process |
|
| Gene Ontology(MF) |
GO:0016620 |
oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor |
|
| Pfam |
PF03015.14 |
Male sterility protein |
6.4e-22 |
| Pfam |
PF07993.7 |
Male sterility protein |
3.6e-06 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
| Gene ID |
| Pn.11831 |
| Pn.14013 |
Orthologous genes
| Species |
Gene ID |
| C. quinquefasciatus |
CPIJ000104 |
| D. plexippus |
DPOGS211702PA |
| D. melanogaster |
FBgn0033464 |
| T. castaneum |
TC015379 |
| T. castaneum |
TC015576 |
| A. gambiae |
AGAP005515 |
| A. aegypti |
AAEL013648 |
| P. vanderplanki |
Pv.03328 |
| P. vanderplanki |
Pv.06356 |
| T. castaneum |
TC015335 |
| S. invicta |
SI2.2.0_03625 |
| P. humanus |
PHUM288740-PA |
| B. mori |
BGIBMGA011148-TA |
| A. mellifera |
GB13695-PA |
| P. vanderplanki |
Pv.06355 |
| N. vitripennis |
NV15381-PA |