MidgeBase gene description page [Pn.12677]
Outline
| Gene ID | Pn.12677 |
| Type | Protein coding gene |
| Scaffold | PnScaf17281 |
| Start | 6017 |
| End | 7845 |
| Direction | - |
Sequence
Transcript: 1305 (bp)
ATGTTGCGCGAAGTTCTGCTTGCGCTTTTCGCGAATGTCGGTTCGTTTTATTTTGGAGTGACTGTGGCTTGGTCATCGCCGGTCGGTGCAAAAATCTTCGAAAGTGAGGAGTATGAATTTCATATTTCGAGAAATCAGTTCGGGCTGGCTGTGGGCATTGTGTCGCTTGGCGCGATCGTCGGTGGAATTCCTTCGGGCATCTTGAGACACAAGGCTGGAACGAAGAAAACGATGTTTTATTTTTCGCTGCCTGCGGCATTTGGATCTGCGCTAATTTTAACTGCCTCTGACTTATTTATGCTACTTACTGGAAGATTCCTAATCGGTGTCACAATCGGCTGCTTTCTTTTTCTTGTGCAAATTTACGTAGGCGAAGTGAGCAGCGATAAGAACCGCAGCAGTTTGTTGAACTTCATTCACATTCTAGTGCACTCGGGCGTGCTCTTCGTGTACGTTTTGGGGCAGCTAGTCAGCCTGCGGACGCTGAACATCATTTGCGGGGCAATTCCCGTAATCTACGGTCTTTGCTTTCTTCTGTTCATGCCCGAGACCAAACCTTATCTAATCAGCAAGGGAAAGTACGAAAGCAATTCACATGCAGCGGAGATGAAGGAACTAAAGCGCAACGTACAGCAGATGGAGGTGAAAAAGCGAAGCGCGCTGGAGTTGCTCCAAGACAAGGCCACGAGGAGAGCGATGTTCATCATGGTCATGCAGTTCACATTTTTCCAAGCGTCAGGAATCAACGCCGTCAACTTTTACGCGAAGACCATCTTCATTGAGGCAGGCGTGAACATCAACCCGGGACTCGCCTCGATCATCAACGTCAGCGTGCTGTGCCTGAGTGCGATCGTATCAGTTTTCTATGCCAGAAAGCTCGGTCGACGACCGATGTTGTTCATCTTCAATGCAATGACAGTTCTGAGCTTGGTCGGGCTCGGAATATACTTTTCGATGAAGGATAGCGGTCGCTCGGTCGAGAGCTTTCGGTGGCTCCCCCTCGTGTCCTTGTGCATGAACTCGATCGCCTTCTGCATGGGAATGGCGCCTGTGACTTATGGCCTACTCGGTGAGCTCTTCACAATCGAAGCGAAGAAAGTTCTCGCGCCAATCGCTCAAATCGTTAGCCATGCACTGACCTTTCTCATTGGAATTTCCTTTCCGTTCCTGTCGACGAGCATTGGCATCGGAAATATTTTCCTGATCTTTACCTCAACAACGTTCATTGATATTATTTTCGGATATTTCTTCATACCTGAAACCAAAGGGAAGTCCTTCGCCGAAATCCAAGCCGAACTCAGTAAA
Protein: 435 (aa)
MLREVLLALFANVGSFYFGVTVAWSSPVGAKIFESEEYEFHISRNQFGLAVGIVSLGAIVGGIPSGILRHKAGTKKTMFYFSLPAAFGSALILTASDLFMLLTGRFLIGVTIGCFLFLVQIYVGEVSSDKNRSSLLNFIHILVHSGVLFVYVLGQLVSLRTLNIICGAIPVIYGLCFLLFMPETKPYLISKGKYESNSHAAEMKELKRNVQQMEVKKRSALELLQDKATRRAMFIMVMQFTFFQASGINAVNFYAKTIFIEAGVNINPGLASIINVSVLCLSAIVSVFYARKLGRRPMLFIFNAMTVLSLVGLGIYFSMKDSGRSVESFRWLPLVSLCMNSIAFCMGMAPVTYGLLGELFTIEAKKVLAPIAQIVSHALTFLIGISFPFLSTSIGIGNIFLIFTSTTFIDIIFGYFFIPETKGKSFAEIQAELSK
| Type | Start | End | Length |
| CDS |
6020 |
6274 |
255 |
| CDS |
6345 |
7094 |
750 |
| CDS |
7489 |
7757 |
269 |
| CDS |
7815 |
7845 |
31 |
| intron |
6275 |
6344 |
70 |
| intron |
7095 |
7488 |
394 |
| intron |
7758 |
7814 |
57 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_002062105 |
GK17357 [Drosophila willistoni] gb|EDW73091.1| GK17357 [Drosophila willistoni] |
8e-70 |
| InterPro |
IPR005829 |
Sugar transporter, conserved site |
|
| InterPro |
IPR020846 |
Major facilitator superfamily domain |
|
| InterPro |
IPR005828 |
General substrate transporter |
|
| InterPro |
IPR016196 |
Major facilitator superfamily domain, general substrate transporter |
|
| Gene Ontology(BP) |
GO:0006810 |
transport |
|
| Gene Ontology(BP) |
GO:0055085 |
transmembrane transport |
|
| Gene Ontology(CC) |
GO:0016020 |
membrane |
|
| Gene Ontology(CC) |
GO:0016021 |
integral to membrane |
|
| Gene Ontology(MF) |
GO:0022857 |
transmembrane transporter activity |
|
| Gene Ontology(MF) |
GO:0005215 |
transporter activity |
|
| Pfam |
PF00083.19 |
Sugar (and other) transporter |
1.3e-53 |
| Pfam |
PF07690.11 |
Major Facilitator Superfamily |
8.8e-28 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| P. vanderplanki |
Pv.10110 |