MidgeBase gene description page [Pn.12653]
Outline
| Gene ID | Pn.12653 |
| Type | Protein coding gene |
| Scaffold | PnScaf17210 |
| Start | 99 |
| End | 473 |
| Direction | - |
Sequence
Transcript: 306 (bp)
ATGTTTTCAAAAATCGTCATTGCCTTCCAGTCGAAGCACGTCCAGCTGAACGAGGTCAAAAATGCAGCAATTATCACGCTCAACCGACCCGAGAAGATGAACACCTTCACTCCCGAGATGCCAGATCAGCTGTTCAACATAATCAAGGCTCTTGAGTCGTCGGACAAATCGCACGTGGTCATACAGGGCGAGGGCAAGGCATTCAGTGCCGGCCAAGACCTTAAGGAGATCATCTCTGTGCCAGAAAATGAGGTTTTTATTTTTATTTTTACAATAAGGGGAACAGGCCTAAATTTTGTACGTGCC
Protein: 102 (aa)
MFSKIVIAFQSKHVQLNEVKNAAIITLNRPEKMNTFTPEMPDQLFNIIKALESSDKSHVVIQGEGKAFSAGQDLKEIISVPENEVFIFIFTIRGTGLNFVRA
| Type | Start | End | Length |
| CDS |
102 |
282 |
181 |
| CDS |
349 |
473 |
125 |
| intron |
283 |
348 |
66 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
NP_343954 |
enoyl CoA hydratase [Sulfolobus solfataricus P2] ref|ZP_06387649.1| enoyl CoA hydratase (paaF-7) [Sulfolobus solfataricus 98/2] gb|AAK42744.1| Enoyl CoA hydratase (paaF-7) [Sulfolobus solfataricus P2] gb|ACX90717.1| Enoyl-CoA hydratase/isomerase [Sulfolobus solfataricus 98/2] |
1e-09 |
| InterPro |
IPR001753 |
Crotonase, core |
|
| Gene Ontology(BP) |
GO:0008152 |
metabolic process |
|
| Gene Ontology(MF) |
GO:0003824 |
catalytic activity |
|
| Pfam |
PF00378.15 |
Enoyl-CoA hydratase/isomerase family |
2e-11 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes