MidgeBase gene description page [Pn.12645]
Outline
| Gene ID | Pn.12645 |
| Type | Protein coding gene |
| Scaffold | PnScaf17187 |
| Start | 4382 |
| End | 4920 |
| Direction | + |
Sequence
Transcript: 417 (bp)
ATGGTCGATAATGAACAACACTTACGTGATCTTCAACGCGAGTACTTGGATTTTCTCGACGATGAGGAGGACCAAGGAATTTACGCGAACCAAGTGAAGACAATGATTGCCGAGGAGGGGAAGCGTTTGCTGGTCAACATCAACGATTTAAGGAAAAAGAATCCGACTCGAGCACAAGCACTCTTGAACAATGCATTCGAAGAGCAGCATGCATTTTCTCGTGCTCTTAAAGAATTTGTCCAATCAATTCAACCTACTTATGCTAAGACTCAAGAAGAATTCCACGTCGCATTCGAGGGAAGTTTCGGAAACAAACACGTGACACCTCGCCAGCTGACTTCTCGCTTCCTCGGAAGCCTCCGTCCACTACTGCCCGGCTACGAACAAGTTTATGGAACGAAAATACACAGATGCCAC
Protein: 139 (aa)
MVDNEQHLRDLQREYLDFLDDEEDQGIYANQVKTMIAEEGKRLLVNINDLRKKNPTRAQALLNNAFEEQHAFSRALKEFVQSIQPTYAKTQEEFHVAFEGSFGNKHVTPRQLTSRFLGSLRPLLPGYEQVYGTKIHRCH
| Type | Start | End | Length |
| CDS |
4382 |
4447 |
66 |
| CDS |
4508 |
4801 |
294 |
| CDS |
4861 |
4917 |
57 |
| intron |
4448 |
4507 |
60 |
| intron |
4802 |
4860 |
59 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_001661938 |
DNA replication licensing factor MCM3 [Aedes aegypti] gb|EAT36086.1| DNA replication licensing factor MCM3 [Aedes aegypti] |
1e-46 |
| InterPro |
IPR016027 |
Nucleic acid-binding, OB-fold-like |
|
| Pfam |
PF08641.7 |
Kinetochore protein Mis14 like |
0.093 |
| Pfam |
PF06878.6 |
Pkip-1 protein |
0.0016 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes