MidgeBase gene description page [Pn.12577]
Outline
| Gene ID | Pn.12577 |
| Type | Protein coding gene |
| Scaffold | PnScaf17020 |
| Start | 21702 |
| End | 22880 |
| Direction | + |
Sequence
Transcript: 609 (bp)
ATGGCAATGAGGAATATGAACATTGATGTTGAGGTCAATACGTTAGACATTCTCAACGGCGAGCATCGATCCGGCGATTTTCCGAAGATTAATCCTCGCATGATTGTCCCGACAATCGTCGACGGTGATTTCGTTCTGTGCGAGTCGAAGGCGATTCTCATGTACTTGCCCCACAAGATGGGCATCTGCAAGGGTCGAATGTTCTATCCGAAGTGTCCCAAGACGCGAGCGCTCGTCAACCAGAGGCTGCTGTTTGACTCGTGCGACTTTTACCCCACCATCGAGCAGATCGTAGGCATGAGCTTCGGCGAGGAGCCGATCCTGACCATACGTCACAAGGTTGCGCTGCACAAGGCTCTCGCCACCATGGAGAGCTTTCTGGAGGGCGGCGAGTTTTTCGTCGGCGAAAACCCGACCATCGCAGACTTTGCCTTCTGCTCGTCGGTCGCAATGTTAATTGAGCTGGGATTCGACATCGACGACTTTCCCAATGTCGCAGCGTGGTTCGAACGCATGGAGTCCCTCAAGGCATTTAACGAGCTGAAAGCGGGCGCGCAACAAATGGGAAAAATCGTCACGGCGAAATTGAAAAATTCATTTAGCGATTTG
Protein: 203 (aa)
MAMRNMNIDVEVNTLDILNGEHRSGDFPKINPRMIVPTIVDGDFVLCESKAILMYLPHKMGICKGRMFYPKCPKTRALVNQRLLFDSCDFYPTIEQIVGMSFGEEPILTIRHKVALHKALATMESFLEGGEFFVGENPTIADFAFCSSVAMLIELGFDIDDFPNVAAWFERMESLKAFNELKAGAQQMGKIVTAKLKNSFSDL
| Type | Start | End | Length |
| CDS |
21702 |
21734 |
33 |
| CDS |
22302 |
22877 |
576 |
| intron |
21735 |
22301 |
567 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
ABV44726 |
glutathione S-transferase-like protein [Phlebotomus papatasi] |
8e-35 |
| InterPro |
IPR010987 |
Glutathione S-transferase, C-terminal-like |
|
| InterPro |
IPR004046 |
Glutathione S-transferase, C-terminal |
|
| InterPro |
IPR017933 |
Glutathione S-transferase/chloride channel, C-terminal |
|
| InterPro |
IPR012336 |
Thioredoxin-like fold |
|
| InterPro |
IPR004045 |
Glutathione S-transferase, N-terminal |
|
| Gene Ontology(MF) |
GO:0005515 |
protein binding |
|
| Pfam |
PF13410.1 |
Glutathione S-transferase, C-terminal domain |
2.5e-08 |
| Pfam |
PF13409.1 |
Glutathione S-transferase, N-terminal domain |
4e-07 |
| Pfam |
PF02798.15 |
Glutathione S-transferase, N-terminal domain |
5.1e-09 |
| Pfam |
PF13417.1 |
Glutathione S-transferase, N-terminal domain |
9.1e-07 |
| Pfam |
PF00043.20 |
Glutathione S-transferase, C-terminal domain |
3.8e-12 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| P. vanderplanki |
Pv.02669 |